RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TNFSF12O43508 249 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 IRF2P14316 349 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MAOBP27338 520 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SFTPDP35247 375 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 TMBIM6P55061 237 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ACTA2P62736 377 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ACTG2P63267 376 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF45Q02386 682 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MOGSQ13724 837 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF789Q5FWF6 425 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ASRGL1Q7L266 308 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 COMTD1Q86VU5 262 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ELMOD2Q8IZ81 293 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HS6ST2Q96MM7 605 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 TREX2Q9BQ50 279 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MAB21L2Q9Y586 359 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 PET100P0DJ07 73 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SOX3P41225 446 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 RPS15P62841 145 aaKnown RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 RAB11BQ15907 218 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 COMMD6Q7Z4G1 85 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 LRRTM3Q86VH5 581 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 OR52N2Q8NGI0 321 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 FAM46BQ96A09 425 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 KATNBL1Q9H079 304 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 TAS2R3Q9NYW6 316 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HIF3AQ9Y2N7 669 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 NPIPB15A6NHN6 443 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 M0R3H8 397 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CEBPBP17676 345 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 DCKP27707 260 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF252P-AS1Q0IIN9 211 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MLC1Q15049 377 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM35AQ53FP2 167 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 LIX1LQ8IVB5 337 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 FRS2Q8WU20 508 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 FAM3CQ92520 227 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SAMD8Q96LT4 415 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MGLLQ99685 303 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HINT2Q9BX68 163 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 DNTTIP1Q9H147 329 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SMOXQ9NWM0 555 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 F5H0A9 414 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 H3BML4 177 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 UGT2B10P36537 528 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 MAP2K3P46734 347 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CLDN8P56748 225 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CLDN2P57739 230 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CTXN1P60606 82 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 HTRA3P83110 453 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 NAGSQ8N159 534 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 URM1Q9BTM9 101 aaKnown RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 NELFAQ9H3P2 528 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CNIH4Q9P003 139 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 H0YJX3 145 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 FBP2O00757 339 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 GOSR2O14653 212 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 OXSR1O95747 527 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SLC16A8O95907 504 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SLC10A3P09131 477 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 CASP6P55212 293 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 EFR3AQ14156 821 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF423Q2M1K9 1284 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 COL28A1Q2UY09 1125 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 STEAP4Q687X5 459 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 C2orf42Q9NWW7 574 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 UBQLN2Q9UHD9 624 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 OR52A4PA6NMU1 304 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MAN2B1O00754 1011 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 IFNA5P01569 189 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 RBMS1P29558 406 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SQSTM1Q13501 440 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TCEAL1Q15170 157 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SLC18B1Q6NT16 456 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 METTL2BQ6P1Q9 378 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 UEVLDQ8IX04 471 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 IL17RCQ8NAC3 791 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 THRSPQ92748 146 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 PTERQ96BW5 349 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 FEVQ99581 238 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 RANBP3Q9H6Z4 567 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 BORCS7-ASMTA0A0B4J1R7 106 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 FMO6PO60774 539 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SPHARQ15513 63 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 C6orf89Q6UWU4 347 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM135Q86UB9 458 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 PLXDC1Q8IUK5 500 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SLC35F2Q8IXU6 374 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 ALDH16A1Q8IZ83 802 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms