RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ENTPD4Q9Y227 616 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 TTLL8A6PVC2 850 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 SLC28A2O43868 658 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 ITGA10O75578 1167 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 CD96P40200 585 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 ST13P50502 369 aaKnown RBP15.54■□□□□ 0.08
SDCBP-201ENST00000260130 SLC37A1P57057 533 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 FUT7Q11130 342 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 MAP4K2Q12851 820 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 TUBA3CQ13748 450 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 CEBPEQ15744 281 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 PRICKLE4Q2TBC4 344 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 TMEM198Q66K66 360 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 TUBA3EQ6PEY2 450 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 GFM2Q969S9 779 aaKnown RBP15.54■□□□□ 0.08
SDCBP-201ENST00000260130 MAELQ96JY0 434 aaKnown RBP15.54■□□□□ 0.08
SDCBP-201ENST00000260130 ANKRD10Q9NXR5 420 aa15.54■□□□□ 0.08
SDCBP-201ENST00000260130 YARS2Q9Y2Z4 477 aaKnown RBP15.54■□□□□ 0.08
SDCBP-201ENST00000260130 COPG1Q9Y678 874 aaKnown RBP15.54■□□□□ 0.08
SDCBP-201ENST00000260130 TRAV17A0A0B4J275 112 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 CD1EP15812 388 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SSTR4P31391 388 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MPIP34949 423 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 ASMTP46597 345 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 RPL5P46777 297 aaKnown RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 OC90Q02509 493 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MGAT2Q10469 447 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 LSAMPQ13449 338 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MAPRE2Q15555 327 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 PRSS53Q2L4Q9 553 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 C16orf47Q6ZP98 133 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 C9orf40Q8IXQ3 194 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 DTNBP1Q96EV8 351 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 BBS4Q96RK4 519 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 C1orf50Q9BV19 199 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 BRINP2Q9C0B6 783 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 AKTIPQ9H8T0 292 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 ETAA1Q9NY74 926 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MAT2BQ9NZL9 334 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 AP4B1Q9Y6B7 739 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF462Q96JM2 2506 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 OR6C76A6NM76 312 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 LRATO95237 230 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 TNFAIP8O95379 198 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 CLPSP04118 112 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SMIM18P0DKX4 95 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 TRHRP34981 398 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 PTGER1P34995 402 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MAD2L1Q13257 205 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SMU1Q2TAY7 513 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF468Q5VIY5 522 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 IL23RQ5VWK5 629 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 FAM111BQ6SJ93 734 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SLC29A4Q7RTT9 530 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SATL1Q86VE3 508 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 VWA5B2Q8N398 1253 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 LIX1Q8N485 282 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 CLHC1Q8NHS4 586 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 SUN3Q8TAQ9 357 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 NUBPLQ8TB37 319 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 CTHRC1Q96CG8 243 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 DGCR14Q96DF8 476 aaKnown RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 MRPS26Q9BYN8 205 aaKnown RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 REEP4Q9H6H4 257 aa15.53■□□□□ 0.08
SDCBP-201ENST00000260130 EIF3LQ9Y262 564 aaKnown RBP15.53■□□□□ 0.08
SDCBP-201ENST00000260130 PRSS51A0A1B0GVH4 220 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 ANKRD33BA6NCL7 494 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 MYO1GB0I1T2 1018 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 WWP2O00308 870 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 AKAP10O43572 662 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 OR2J2O76002 312 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 CLPTM1O96005 669 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 PRPS2P11908 318 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 S1PR1P21453 382 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 CYB561P49447 251 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 MLLT10P55197 1068 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 MS4A2Q01362 244 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 EMX2Q04743 252 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 OR1C1Q15619 314 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 SPATA24Q86W54 205 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 TMEM156Q8N614 296 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 HORMAD2Q8N7B1 307 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 OR7G1Q8NGA0 311 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 SIGLEC12Q96PQ1 595 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 OR10A5Q9H207 317 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 MEAF6Q9HAF1 191 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 LRFN1Q9P244 771 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF639Q9UID6 485 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 CNOT11Q9UKZ1 510 aaKnown RBP15.52■□□□□ 0.08
SDCBP-201ENST00000260130 PCDHGA10Q9Y5H3 936 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 CNTRLQ7Z7A1 2325 aa15.52■□□□□ 0.08
SDCBP-201ENST00000260130 SDHDO14521 159 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 TBX19O60806 448 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 VPS4BO75351 444 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 HLCSP50747 726 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 SSR4P51571 173 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 STX5Q13190 355 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 LTB4RQ15722 352 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 SPINK14Q6IE38 97 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF615Q8N8J6 731 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms