RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MMABQ96EY8 250 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 YIPF4Q9BSR8 244 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 CLK4Q9HAZ1 481 aaKnown RBP16.3■□□□□ 0.2
SRSF1-201ENST00000258962 CUTCQ9NTM9 273 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 ADPRHL2Q9NX46 363 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 TRPC4Q9UBN4 977 aa16.3■□□□□ 0.2
SRSF1-201ENST00000258962 H0YIG0 161 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 TGFBR3LH3BV60 316 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PDLIM1O00151 329 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SELENOWP63302 87 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 KCNJ10P78508 379 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 FUT5Q11128 374 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PPP4R4Q6NUP7 873 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ZDHHC21Q8IVQ6 265 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 NLGN4XQ8N0W4 816 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 OR2L13Q8N349 312 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PACRGLQ8N7B6 248 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 NLGN4YQ8NFZ3 816 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF501Q96CX3 271 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 TPD52L3Q96J77 140 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 VPS50Q96JG6 964 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 BDH2Q9BUT1 245 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 IL1RAPQ9NPH3 570 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 DDX18Q9NVP1 670 aaKnown RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 DNAJB9Q9UBS3 223 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SERTAD3Q9UJW9 196 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 RAB26Q9ULW5 256 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PKD1L2Q7Z442 2459 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 M0QX08 132 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF749O43361 778 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SUV39H1O43463 412 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 RAD1O60671 282 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 NME6O75414 186 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 CST1P01037 141 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 UQCRBP14927 111 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 CLCN2P51788 898 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 TMPRSS3P57727 454 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 VLDLRP98155 873 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 MGAT2Q10469 447 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 MED21Q13503 144 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SYPL1Q16563 259 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 NRF1Q16656 503 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PRICKLE4Q2TBC4 344 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 COL28A1Q2UY09 1125 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 FAM214AQ32MH5 1076 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PRAMEF17Q5VTA0 474 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 DGAT2L6Q6ZPD8 337 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ZBTB49Q6ZSB9 765 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SLC44A2Q8IWA5 706 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 LGI4Q8N135 537 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 CBR4Q8N4T8 237 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 DOK4Q8TEW6 326 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 NKD1Q969G9 470 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 TMBIM1Q969X1 311 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 MS4A4EQ96PG1 132 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 OR7D2Q96RA2 312 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 DOHHQ9BU89 302 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 SPRY4Q9C004 299 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 EQTNQ9NQ60 294 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 THUMPD1Q9NXG2 353 aaKnown RBP16.29■□□□□ 0.2
SRSF1-201ENST00000258962 PTGFRNQ9P2B2 879 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 P2RX2Q9UBL9 471 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 ABCG2Q9UNQ0 655 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 CLDN16Q9Y5I7 305 aa16.29■□□□□ 0.2
SRSF1-201ENST00000258962 C7orf72A4D263 438 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 SLC28A2O43868 658 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 PGM3O95394 542 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 CT62P0C5K7 136 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 CCNYL3P0C7X3 344 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ITGA1P56199 1179 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 IGLV3-21P80748 117 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ERV3-1Q14264 604 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 TRMT12Q53H54 448 aaKnown RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 PWWP2BQ6NUJ5 590 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 MFSD12Q6NUT3 480 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 C6orf15Q6UXA7 325 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 CCDC81Q6ZN84 652 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 TTLL10Q6ZVT0 673 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 PATL1Q86TB9 770 aaKnown RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF595Q8IYB9 648 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ESX1Q8N693 406 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 OR51Q1Q8NH59 317 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF675Q8TD23 568 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 XAGE5Q8WWM1 108 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 C7orf34Q96L11 122 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 ZNF597Q96LX8 424 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 C9orf16Q9BUW7 83 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 RSPO3Q9BXY4 272 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 RUBCNLQ9H714 662 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 MAT2BQ9NZL9 334 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 DHCR7Q9UBM7 475 aaKnown RBP16.28■□□□□ 0.2
SRSF1-201ENST00000258962 KCNE3Q9Y6H6 103 aa16.28■□□□□ 0.2
SRSF1-201ENST00000258962 MAU2Q9Y6X3 613 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms