RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PRSS16Q9NQE7 514 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 ATG4BQ9Y4P1 393 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 ASB4Q9Y574 426 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 A0A1W2PR48 441 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 IRGMA1A4Y4 181 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 FABP12A6NFH5 140 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 SNTNA6NMZ2 147 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 C4orf51C9J302 202 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 VEGFBP49765 207 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 RPS25P62851 125 aaKnown RBP14.33□□□□□ -0.12
DDX56-201ENST00000258772 DUSP2Q05923 314 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 HYAL2Q12891 473 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 TAB1Q15750 504 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 ZIC1Q15915 447 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 NDUFA5Q16718 116 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 SLC36A4Q6YBV0 504 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 PRICKLE2Q7Z3G6 844 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 FAM20CQ8IXL6 584 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 TEX47Q8TBZ9 253 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 CAMK1GQ96NX5 476 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 MED18Q9BUE0 208 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 ISYNA1Q9NPH2 558 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 PRDM7Q9NQW5 492 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 GPR52Q9Y2T5 361 aa14.33□□□□□ -0.12
DDX56-201ENST00000258772 RGS13O14921 159 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 LRRTM2O43300 516 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ERI3O43414 337 aaKnown RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 BCL6P41182 706 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MTNR1AP48039 350 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 RAB28P51157 221 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TAS2R41P59536 307 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 DUSP6Q16828 381 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 CRTC2Q53ET0 693 aaPredicted RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 MRM1Q6IN84 353 aaKnown RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 ANKK1Q8NFD2 765 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 OR8D4Q8NGM9 314 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MS4A6EQ96DS6 147 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ST6GAL2Q96JF0 529 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MARCH7Q9H992 704 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MBNL1Q9NR56 388 aaKnown RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 OR1A2Q9Y585 309 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MEIOCA2RUB1 952 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 SLC30A4O14863 429 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 IDH3BO43837 385 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 PCDH8O95206 1070 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 CSF3P09919 207 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 C8orf89P0DMQ9 161 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ACP5P13686 325 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 HIST1H1TP22492 207 aaPredicted RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 TCEA1P23193 301 aaKnown RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 S100A1P23297 94 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TSPAN31Q12999 210 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ASAH1Q13510 395 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 CAMK1Q14012 370 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 MINDY4Q4G0A6 757 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ZNF311Q5JNZ3 666 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 DDI2Q5TDH0 399 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 PRAMEF8Q5VWM4 474 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 PRAMEF7Q5VXH5 474 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TMEM107Q6UX40 140 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 GDPD1Q8N9F7 314 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ACOT4Q8N9L9 421 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TP53INP1Q96A56 240 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 ZG16BQ96DA0 208 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TM9SF2Q99805 663 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 TEX101Q9BY14 249 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 OSGEPL1Q9H4B0 414 aa14.32□□□□□ -0.12
DDX56-201ENST00000258772 CXXC1Q9P0U4 656 aaPredicted RBP14.32□□□□□ -0.12
DDX56-201ENST00000258772 FAM170BA6NMN3 283 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SEC14L5O43304 696 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 FRS3O43559 492 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 LATO43561 262 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 TMCC2O75069 709 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 UBXN7O94888 489 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 FHP07954 510 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 LIMS3P0CW19 117 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 LIMS4P0CW20 117 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 HOXB3P14651 431 aaPredicted RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 ATP5A1P25705 553 aaKnown RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 DRD3P35462 400 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 IFNGR2P38484 337 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 DAB2P98082 770 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 MLLT1Q03111 559 aaPredicted RBP14.31□□□□□ -0.12
DDX56-201ENST00000258772 MAP4K2Q12851 820 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 ABHD17CQ6PCB6 329 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 UTS2BQ765I0 119 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 GATAD2AQ86YP4 633 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SYT14Q8NB59 555 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 OR56A1Q8NGH5 318 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 UFD1Q92890 307 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SLC38A2Q96QD8 506 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 SNX18Q96RF0 628 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
DDX56-201ENST00000258772 ARHGAP9Q9BRR9 750 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms