RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HHIPQ96QV1 700 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 F2RL3Q96RI0 385 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 PCGF1Q9BSM1 259 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 DDA1Q9BW61 102 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 THAP2Q9H0W7 228 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 PCED1AQ9H1Q7 454 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 SLCO5A1Q9H2Y9 848 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 PCIF1Q9H4Z3 704 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 ISYNA1Q9NPH2 558 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 GPR173Q9NS66 373 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 CENPMQ9NSP4 180 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 MAN2C1Q9NTJ4 1040 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 SCN3BQ9NY72 215 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 FKBPLQ9UIM3 349 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 SLC7A11Q9UPY5 501 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 PKD1L3Q7Z443 1732 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 A6NNC1 897 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ADAMTS3O15072 1205 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ADAP1O75689 374 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 VAPBO95292 243 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PRKCGP05129 697 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ALDOCP09972 364 aaKnown RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 HLA-GP17693 338 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 IFNGR2P38484 337 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 MAGEA2P43356 314 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 HNRNPA0Q13151 305 aaKnown RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ATP6V1FQ16864 119 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 EFHC2Q5JST6 749 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PCID2Q5JVF3 399 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 BICRALQ6AI39 1079 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 AHSA2Q719I0 299 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 COQ8AQ8NI60 647 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ZCCHC10Q8TBK6 192 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 LPAR1Q92633 364 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM203Q969S6 136 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SLCO4A1Q96BD0 722 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 KIF12Q96FN5 646 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CHST5Q9GZS9 411 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 C2orf42Q9NWW7 574 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 FBXL4Q9UKA2 621 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 MRTO4Q9UKD2 239 aaKnown RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PPIEQ9UNP9 301 aaKnown RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 NWD2Q9ULI1 1742 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ELOA3CA0A087WX78 387 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GLYATL1P3A0A0U1RQE8 302 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GLTPD2A6NH11 291 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 FFAR3O14843 346 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GPR42O15529 346 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CDC14BO60729 498 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 FAM155BO75949 473 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 PDGFBP01127 241 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CD2P06729 351 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 INSRRP14616 1297 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 POU3F2P20265 443 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CTSSP25774 331 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ABCD3P28288 659 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 COILP38432 576 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 HOXC5Q00444 222 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 EIF4EBP2Q13542 120 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GTF2H2Q13888 395 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GAS6Q14393 721 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 TCEA2Q15560 299 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GOLGA7BQ2TAP0 167 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 NCR3LG1Q68D85 454 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 CES5AQ6NT32 575 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 GTF2H2CQ6P1K8 395 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 C6orf15Q6UXA7 325 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 KCTD9Q7L273 389 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SSX7Q7RTT5 188 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SERPINA12Q8IW75 414 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 FAM156AQ8NDB6 213 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM56Q96MV1 263 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 NODALQ96S42 347 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 RTP3Q9BQQ7 232 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF426Q9BUY5 554 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SLC12A9Q9BXP2 914 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 DNAJC4Q9NNZ3 241 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-201ENST00000258733 USE1Q9NZ43 259 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM56-RWDD3S4R434 201 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 NUP188Q5SRE5 1749 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 ALS2Q96Q42 1657 aa7.33□□□□□ -1.24
GPNMB-201ENST00000258733 SIPA1L1O43166 1804 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 A0A0U1RQF3 1178 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 TRDCB7Z8K6 153 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 NPIPB9F8W1W9 429 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GFYI3L273 518 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ADAM10O14672 748 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 AP2A2O94973 939 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GLUD1P00367 558 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PMP2P02689 132 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms