RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 DRG1Q9Y295 367 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A0J9YYE9 177 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A1B0GVC2 190 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PRSS51A0A1B0GVH4 220 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ARHGAP33O14559 1287 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 EEF1E1O43324 174 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 RBBP9O75884 186 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SCELO95171 688 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TYMPP19971 482 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ITGB8P26012 769 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PTPN7P35236 360 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CLN3Q13286 438 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GBX1Q14549 363 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TMED4Q7Z7H5 227 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 OR14A16Q8NHC5 309 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GPR151Q8TDV0 419 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MYO19Q96H55 970 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 FBXL18Q96ME1 805 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC6A7Q99884 636 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC35D1Q9NTN3 355 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MIOSQ9NXC5 875 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 LOC102723532A0A0G2JNH3 316 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 MTMR11A4FU01 709 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM86B1E9PN63 330 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 H7C4K7 107 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM189-UBE2V1I3L0A0 370 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 DPM1O60762 260 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM86B2P0C5J1 330 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 HOXB3P14651 431 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CTPS1P17812 591 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 OR3A1P47881 315 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 PRPS1P60891 318 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SORDQ00796 357 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 RBM39Q14498 530 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TAF9Q16594 264 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 RPS26P11Q5JNZ5 115 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 BVESQ8NE79 360 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZDHHC11Q9H8X9 412 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SERINC1Q9NRX5 453 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 DNMT3AQ9Y6K1 912 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 KCNK5O95279 499 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CPNE6O95741 557 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 POMCP01189 267 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CRHP06850 196 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 NT5EP21589 574 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 PTPN3P26045 913 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 DHPSP49366 369 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC16A1P53985 500 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 DLX5P56178 289 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 RAP1AP62834 184 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 FUT2Q10981 343 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM132DQ14C87 1099 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 IRF4Q15306 451 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 C2orf76Q3KRA6 126 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 FIGNL1Q6PIW4 674 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC26A9Q7LBE3 791 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 GABRG1Q8N1C3 465 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF610Q8N9Z0 462 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF738Q8NE65 137 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 PPP1R16AQ96I34 528 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 NELL2Q99435 816 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SEMA6BQ9H3T3 888 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 AIG1Q9NVV5 245 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 BET1LQ9NYM9 111 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 COL22A1Q8NFW1 1626 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ALG1L2C9J202 215 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF12O95522 483 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ADPRHP54922 357 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 NCMAPQ5T1S8 102 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF549Q6P9A3 640 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CNKSR3Q6P9H4 555 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TRILQ7L0X0 811 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SELENOHQ8IZQ5 122 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 GCNT2Q8N0V5 402 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 OR56B1Q8NGI3 324 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 OR5M8Q8NGP6 311 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SEMA4DQ92854 862 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 KIF12Q96FN5 646 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF382Q96SR6 550 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC6A20Q9NP91 592 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TAS2R13Q9NYV9 303 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF490Q9ULM2 529 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TNFSF13BQ9Y275 285 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZFP37Q9Y6Q3 630 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A1W2PQL4 384 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 COX5BP10606 129 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SPNP16150 400 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 RPS26P62854 115 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ARHGAP1Q07960 439 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CEACAM7Q14002 265 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 LRRC32Q14392 662 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CSHL1Q14406 222 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ECM1Q16610 540 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 UPP1Q16831 310 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ZRANB3Q5FWF4 1079 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms