RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TAP2Q03519 686 aa12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 GAL3ST4Q96RP7 486 aa12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 UBE2J1Q9Y385 318 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
PCDHGA3-201ENST00000253812 TSPAN11A1L157 253 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 EIF3FO00303 357 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CA12O43570 354 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CYTIPO60759 359 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CD9P21926 228 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 UQCRC2P22695 453 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 NDUFA6P56556 154 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 PPA1Q15181 289 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 TARBP2Q15633 366 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZNF791Q3KP31 576 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 UGT3A2Q3SY77 523 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ENTHD1Q8IYW4 607 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CELF2-AS1Q8N7Q2 184 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 LRRC46Q96FV0 321 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SLC30A3Q99726 388 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 DPEP3Q9H4B8 488 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZDHHC3Q9NYG2 299 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SARDHQ9UL12 918 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 BLOC1S5-TXNDC5H3BN57 136 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 GAAP10253 952 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 MASP1P48740 699 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 KCNIP4Q6PIL6 250 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SLC29A4Q7RTT9 530 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 OR6V1Q8N148 313 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 DNAJC22Q8N4W6 341 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 KCT2Q8NC54 265 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 OR4K1Q8NGD4 311 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 BRIX1Q8TDN6 353 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 UTS2RQ9UKP6 389 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 A3GALT2U3KPV4 340 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SORBS2O94875 1100 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 DIRAS3O95661 229 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 AKAIN1P0CW23 69 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SELPP16109 830 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 TAS2R20P59543 309 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 C14orf80Q86SX3 495 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 REM2Q8IYK8 340 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 RGL4Q8IZJ4 473 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 RAB8BQ92930 207 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZNF578Q96N58 590 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 UHRF1Q96T88 793 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 KCNK13Q9HB14 408 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 EMC7Q9NPA0 242 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CBY3A6NI87 242 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CACNG3O60359 315 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 HTR3BO95264 441 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SPATA31D3P0C874 917 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 GABRB3P28472 473 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 PBX2P40425 430 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 RCAN2Q14206 197 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 GK3PQ14409 553 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 LRRC26Q2I0M4 334 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 TCTE1Q5JU00 501 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 SPATA31D4Q6ZUB0 917 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZNF808Q8N4W9 903 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 ADAMTS14Q8WXS8 1223 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 BTBD2Q9BX70 525 aa12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-201ENST00000253812 CARNS1A5YM72 827 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 MEGF11A6BM72 1044 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 NAA10P41227 235 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 POU6F2P78424 691 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 PDZK1IP1Q13113 114 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 MINDY4Q4G0A6 757 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 UNC50Q53HI1 259 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 SIRPB2Q5JXA9 342 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 CEP68Q76N32 757 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 LYSMD2Q8IV50 215 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 RNF32Q9H0A6 362 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 MINDY3Q9H8M7 445 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 A0A0G2JN53 185 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 MED6O75586 246 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 VNN1O95497 513 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 C1QBP02746 253 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 S100A11P31949 105 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 CTNNB1P35222 781 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 SOX3P41225 446 aa12.53□□□□□ -0.4
PCDHGA3-201ENST00000253812 HSD11B2P80365 405 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms