RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NRGNQ92686 78 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 TMCO6Q96DC7 493 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 ZNF382Q96SR6 550 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 HBEGFQ99075 208 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 EPB41L4BQ9H329 900 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 PFDN4Q9NQP4 134 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 RASSF1Q9NS23 344 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 TMEM216Q9P0N5 145 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 MPDZO75970 2070 aa19.21■□□□□ 0.67
NEDD8-201ENST00000250495 FAM221AA4D161 298 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 MBD3L4A6NDZ8 208 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 MBD3L3A6NE82 208 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 MBD3L5A6NJ08 208 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 UGT2B11O75310 529 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 PCSK2P16519 638 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 IMPDH1P20839 514 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 CTSSP25774 331 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 HMOX2P30519 316 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 OPRM1P35372 400 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 SOX18P35713 384 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 ZNF136P52737 540 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 DUSP2Q05923 314 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 FLYWCH1Q4VC44 716 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 DESI1Q6ICB0 168 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 FAM180BQ6P0A1 224 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 GPRIN3Q6ZVF9 776 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 KIF18BQ86Y91 864 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 CCDC116Q8IYX3 515 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 SIMC1Q8NDZ2 872 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 MBD3L2Q8NHZ7 208 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 ZPLD1Q8TCW7 415 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 ZNF675Q8TD23 568 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 ERP27Q96DN0 273 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 GPATCH1Q9BRR8 931 aaKnown RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 CLEC4MQ9H2X3 399 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 HEY2Q9UBP5 337 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 NFU1Q9UMS0 254 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 DLGAP4Q9Y2H0 992 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
NEDD8-201ENST00000250495 GPR55Q9Y2T6 319 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 ANKHD1Q8IWZ3 2542 aaKnown RBP19.2■□□□□ 0.66
NEDD8-201ENST00000250495 AKAP6Q13023 2319 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 C2orf72A6NCS6 295 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 FRG2CA6NGY1 282 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 OR6C70A6NIJ9 312 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 DLX3O60479 287 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 ABCB7O75027 752 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 REM1O75628 298 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 IL18BPO95998 194 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 ABHD2P08910 425 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 CYP4B1P13584 511 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 CPN1P15169 458 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 ATP5F1P24539 256 aaPredicted RBP19.19■□□□□ 0.66
NEDD8-201ENST00000250495 PTGDSP41222 190 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 MRPS35P82673 323 aaKnown RBP19.19■□□□□ 0.66
NEDD8-201ENST00000250495 HEPACAMQ14CZ8 416 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 LTB4RQ15722 352 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 TCHHL1Q5QJ38 904 aaPredicted RBP19.19■□□□□ 0.66
NEDD8-201ENST00000250495 SLC22A9Q8IVM8 553 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 GOT1L1Q8NHS2 421 aaPredicted RBP19.19■□□□□ 0.66
NEDD8-201ENST00000250495 DTNBP1Q96EV8 351 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 COL21A1Q96P44 957 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 FOXC2Q99958 501 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 GALNT9Q9HCQ5 603 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 GIMAP4Q9NUV9 329 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 EHD3Q9NZN3 535 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 MAPRE3Q9UPY8 281 aa19.19■□□□□ 0.66
NEDD8-201ENST00000250495 GNG14A0A1W2PPG7 69 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 CCDC151A5D8V7 595 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 PRAMEF25A6NGN4 478 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 A6NNC1 897 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 PCDH7O60245 1069 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 IL3P08700 152 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 PSPHP78330 225 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 DAZAP2Q15038 168 aaPredicted RBP19.18■□□□□ 0.66
NEDD8-201ENST00000250495 SPIN4Q56A73 249 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 ZNF628Q5EBL2 1059 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 DCST1Q5T197 706 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 ENPP6Q6UWR7 440 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 TRMT10CQ7L0Y3 403 aaKnown RBP19.18■□□□□ 0.66
NEDD8-201ENST00000250495 CNPY4Q8N129 248 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 WDSUB1Q8N9V3 476 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 OR14L1PQ8NHC6 308 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 TMBIM1Q969X1 311 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 TMEM237Q96Q45 408 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 SERHLQ9NQF3 203 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 DOCK7Q96N67 2140 aa19.18■□□□□ 0.66
NEDD8-201ENST00000250495 TUBAL3A6NHL2 446 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 CHN1P15882 459 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 GCAP28676 217 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 KRT20P35900 424 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 PRKAA2P54646 552 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 PKNOX1P55347 436 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 ACSM2AQ08AH3 577 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 ACSM2BQ68CK6 577 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 CHDHQ8NE62 594 aaPredicted RBP19.17■□□□□ 0.66
NEDD8-201ENST00000250495 EXOSC8Q96B26 276 aaKnown RBP19.17■□□□□ 0.66
NEDD8-201ENST00000250495 RMND5BQ96G75 393 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms