RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 HMGA2P52926 109 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 RHAGQ02094 409 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 SYT14P1Q58G82 188 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 FAM78AQ5JUQ0 283 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 AGAP6Q5VW22 663 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 AGAP4Q96P64 663 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 SAP130Q9H0E3 1048 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 SIRT3Q9NTG7 399 aaPredicted RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 CLCA3PQ9Y6N3 262 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 C2orf92A0A1B0GVN3 265 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 KLHL18O94889 574 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 CD8BP10966 210 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 PSKH1P11801 424 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 MPIP34949 423 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 RAB28P51157 221 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 GNA13Q14344 377 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 LARS2Q15031 903 aaKnown RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 MLIPQ5VWP3 458 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 ATCAYQ86WG3 371 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 OR51G2Q8NGK0 314 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 LCN9Q8WX39 176 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 SERHL2Q9H4I8 314 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 C11orf49Q9H6J7 331 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 PELI2Q9HAT8 420 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 DPP7Q9UHL4 492 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 DOC2BQ14184 412 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 QPRTQ15274 297 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 NRMQ8IXM6 262 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 LINC01555Q8NAE3 123 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 TMIEQ8NEW7 156 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 ANKK1Q8NFD2 765 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 BADQ92934 168 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 WDR34Q96EX3 536 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF486Q96H40 463 aaPredicted RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF582Q96NG8 517 aaPredicted RBP11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 MCHR1Q99705 422 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 OR51V1Q9H2C8 321 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 REV1Q9UBZ9 1251 aa11.88□□□□□ -0.51
RAB3IP-201ENST00000247833 PRDX1Q06830 199 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF793Q6ZN11 406 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 GHDCQ8N2G8 530 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 BARHL1Q9BZE3 327 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 FKBP14Q9NWM8 211 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 NUFIP1Q9UHK0 495 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A4GNTQ9UNA3 340 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SNX7Q9UNH6 387 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 BCL6P41182 706 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 WNT4P56705 351 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 CCNJQ5T5M9 372 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC36A4Q6YBV0 504 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 COMTD1Q86VU5 262 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 GALNT12Q8IXK2 581 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 ATP6V1C2Q8NEY4 427 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SUN3Q8TAQ9 357 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SECISBP2Q96T21 854 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 GPA33Q99795 319 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF232Q9UNY5 417 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 MRPS7Q9Y2R9 242 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 PCDHGA4Q9Y5G9 962 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 HEATR5BQ9P2D3 2071 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A0A087WUU8 490 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A0A1B0GVC2 190 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A6NIN4 97 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 KAT7O95251 611 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 AIFM1O95831 613 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 RECKO95980 971 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 HSD17B2P37059 387 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SIM1P81133 766 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 REEP5Q00765 189 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 CDC20Q12834 499 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 IRF3Q14653 427 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 DEFB134Q4QY38 66 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 METRNLQ641Q3 311 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 CCDC190Q86UF4 302 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 RASGRP3Q8IV61 690 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 NANOGP1Q8N7R0 232 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 NLGN4YQ8NFZ3 816 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 OR52E1Q8NGJ3 308 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC6A17Q9H1V8 727 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 MARK1Q9P0L2 795 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 ICKQ9UPZ9 632 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A3GALT2U3KPV4 340 aa11.87□□□□□ -0.51
RAB3IP-201ENST00000247833 A0A1W2PR48 441 aa11.86□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms