RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RNLSQ5VYX0 342 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 MTSS1LQ765P7 747 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 OR4E2Q8NGC2 313 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 KLHL6Q8WZ60 621 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 GAL3ST3Q96A11 431 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 SLC30A2Q9BRI3 323 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 C11orf16Q9NQ32 467 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 NPAP1Q9NZP6 1156 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 RANBP2P49792 3224 aaKnown RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 NINQ8N4C6 2090 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 A0A1W2PS29 197 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 EMC8O43402 210 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 ALPPL2P10696 532 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 MAN2A2P49641 1150 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 XKP51811 444 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 RPS15AP62244 130 aaKnown RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 PRR5P85299 388 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 NCF4Q15080 339 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 SSX1Q16384 188 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 TMEM107Q6UX40 140 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 CCBE1Q6UXH8 406 aaPredicted RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 OLIG3Q7RTU3 272 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 LINC00471Q8N535 108 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 SETD6Q8TBK2 473 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 NT5CQ8TCD5 201 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 SIPA1Q96FS4 1042 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 OTUB1Q96FW1 271 aaPredicted RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 OPALINQ96PE5 141 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 CTRCQ99895 268 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 POLR2J3Q9H1A7 115 aaKnown RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 GIMAP4Q9NUV9 329 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 QPCTLQ9NXS2 382 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 ZNF624Q9P2J8 865 aaPredicted RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 RPL36Q9Y3U8 105 aaKnown RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 MPIP34949 423 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 FEN1P39748 380 aaKnown RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 PODNL1Q6PEZ8 512 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 FLVCR1-AS1Q8TAF5 88 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 TMEM80Q96HE8 168 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 PRRC1Q96M27 445 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 WDR92Q96MX6 357 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 YIPF4Q9BSR8 244 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 MND1Q9BWT6 205 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 PINK1Q9BXM7 581 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 SEC14L4Q9UDX3 406 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 KLHL3Q9UH77 587 aa20.59■□□□□ 0.89
RNF39-201ENST00000244360 MDC1Q14676 2089 aaKnown RBP20.59■□□□□ 0.89
RNF39-201ENST00000244360 BTN3A3O00478 584 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 ENTPD6O75354 484 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 SOX14O95416 240 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 IGFBP1P08833 259 aaPredicted RBP20.58■□□□□ 0.89
RNF39-201ENST00000244360 C8orf89P0DMQ9 161 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 AK4P27144 223 aaPredicted RBP20.58■□□□□ 0.89
RNF39-201ENST00000244360 DGKEP52429 567 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 ADAM15Q13444 863 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 ENPP7Q6UWV6 458 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 NRROSQ86YC3 692 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 OR6T1Q8NGN1 323 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 TMCO6Q96DC7 493 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 ELP4Q96EB1 424 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 C16orf58Q96GQ5 468 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 FNDC11Q9BVV2 318 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 SMURF1Q9HCE7 757 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 MSRAQ9UJ68 235 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 NCKAP1Q9Y2A7 1128 aa20.58■□□□□ 0.89
RNF39-201ENST00000244360 LSM2Q9Y333 95 aaKnown RBP20.58■□□□□ 0.89
RNF39-201ENST00000244360 A6NCN8 305 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 GPX5O75715 221 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 APBB3O95704 486 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 SPNP16150 400 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 CASP3P42574 277 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 COX10Q12887 443 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 TARDBPQ13148 414 aaKnown RBP eCLIP20.58■□□□□ 0.88
RNF39-201ENST00000244360 HTR4Q13639 388 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 NDUFA9Q16795 377 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 LRIT3Q3SXY7 679 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 CASP12Q6UXS9 341 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 RIPOR3Q96MK2 946 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 OR7D2Q96RA2 312 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 KCNE3Q9Y6H6 103 aa20.58■□□□□ 0.88
RNF39-201ENST00000244360 F5P12259 2224 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 SYT5O00445 386 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 NME6O75414 186 aaPredicted RBP20.57■□□□□ 0.88
RNF39-201ENST00000244360 NR2F6P10588 404 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 BTN3A2P78410 334 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 GDPD3Q7L5L3 318 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 ASPGQ86U10 573 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 MORN4Q8NDC4 146 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 OR9A2Q8NGT5 310 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 SLC22A18Q96BI1 424 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 BMFQ96LC9 184 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 C10orf90Q96M02 699 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 HHATLQ9HCP6 504 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 CA5BQ9Y2D0 317 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 H0Y8X5 98 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 PSMA1P25786 263 aaKnown RBP20.57■□□□□ 0.88
RNF39-201ENST00000244360 MC3RP41968 323 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 RGS1Q08116 209 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 KCT2Q8NC54 265 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 OR4K5Q8NGD3 323 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms