RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF382Q96SR6 550 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 B4GALT3O60512 393 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 DLSTP36957 453 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 HNRNPKP61978 463 aaKnown RBP eCLIP7.16□□□□□ -1.26
RIF1-201ENST00000243326 RIN1Q13671 783 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 PDZD9Q8IXQ8 264 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GRHPRQ9UBQ7 328 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 HMGN1P05114 100 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OTPQ5XKR4 325 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZSWIM9Q86XI8 627 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OR8K5Q8NH50 307 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GGHQ92820 318 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OSTF1Q92882 214 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZNF419Q96HQ0 510 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 ANKRD60Q9BZ19 345 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CD93Q9NPY3 652 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 AP1M2Q9Y6Q5 423 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 IGFBP1P08833 259 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 MAGEA6P43360 314 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ARHGAP40Q5TG30 622 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SLC7A7Q9UM01 511 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZNF726A6NNF4 738 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TOR1AO14656 332 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 HLA-DPB1P04440 258 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 APODP05090 189 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 LCN8Q6JVE9 175 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 MEX3BQ6ZN04 569 aaKnown RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 SLC29A4Q7RTT9 530 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TMEFF1Q8IYR6 380 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 UHRF1Q96T88 793 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 TBL1XR1Q9BZK7 514 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 DCDC2BA2VCK2 349 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RHPN2P1A8MT19 583 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 MC2RQ01718 297 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RFTN1Q14699 578 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 HUS1BQ8NHY5 278 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 FANCFQ9NPI8 374 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 COLEC10Q9Y6Z7 277 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CCSO14618 274 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 FDXRP22570 491 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 PNLIPRP1P54315 467 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CLDN2P57739 230 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 TIGD3Q6B0B8 471 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 METAP1DQ6UB28 335 aaPredicted RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 C1orf74Q96LT6 269 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 FN3KQ9H479 309 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 ST6GALNAC4Q9H4F1 302 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 TMEM231Q9H6L2 316 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 PCTPQ9UKL6 214 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 MRPS33Q9Y291 106 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 SMIM18P0DKX4 95 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 POU3F4P49335 361 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 AP1S1P61966 158 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 TBPL1P62380 186 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 S100A12P80511 92 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 LCN10Q6JVE6 187 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 NRMQ8IXM6 262 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 GIMAP1Q8WWP7 306 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 DDX31Q9H8H2 851 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 VSX1Q9NZR4 365 aaPredicted RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 VAPAQ9P0L0 249 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 OR1A2Q9Y585 309 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 C5P01031 1676 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CPED1A4D0V7 1026 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 HPRP00739 348 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CSTBP04080 98 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 SNRPBP14678 240 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 DAPP51397 102 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 SSTP61278 116 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 SLAMF1Q13291 335 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 HTR3BO95264 441 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 HTR1EP28566 365 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 MVKQ03426 396 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 PRSS45Q7RTY3 260 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CCDC54Q8NEL0 328 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 NTAN1Q96AB6 310 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 SEC22CQ9BRL7 303 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 KLRF1Q9NZS2 232 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 SLIT2O94813 1529 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CREBL2O60519 120 aaPredicted RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 RBBP9O75884 186 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 NUDT7P0C024 238 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 GALK2Q01415 458 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 LEG1Q6P5S2 330 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 GPR135Q8IZ08 494 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 EGLN2Q96KS0 407 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.15□□□□□ -1.26
RIF1-201ENST00000243326 PTHP01270 115 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 MLLT3P42568 568 aaPredicted RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 AKR1C2P52895 323 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 AKR1C1Q04828 323 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 FADDQ13158 208 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 LYPD4Q6UWN0 246 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 DCP2Q8IU60 420 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 ACDQ96AP0 544 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 PLD4Q96BZ4 506 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms