RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 TRIM8Q9BZR9 551 aa11.68□□□□□ -0.54
PDZD11-201ENST00000239666 METTL7AQ9H8H3 244 aa11.68□□□□□ -0.54
PDZD11-201ENST00000239666 RRAGDQ9NQL2 400 aaPredicted RBP11.68□□□□□ -0.54
PDZD11-201ENST00000239666 ALKBH4Q9NXW9 302 aa11.68□□□□□ -0.54
PDZD11-201ENST00000239666 SENP1Q9P0U3 644 aa11.68□□□□□ -0.54
PDZD11-201ENST00000239666 ZNF629Q9UEG4 869 aaPredicted RBP11.68□□□□□ -0.54
PDZD11-201ENST00000239666 FRG2CA6NGY1 282 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 HRKO00198 91 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TO15178 435 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 PCDH7O60245 1069 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 DLX3O60479 287 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 ZNF354AO60765 605 aaPredicted RBP11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TRAPPC6AO75865 159 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 EPPINO95925 133 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 GPX3P22352 226 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TIMP3P35625 211 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 PSMD4P55036 377 aaKnown RBP11.67□□□□□ -0.54
PDZD11-201ENST00000239666 NUP107P57740 925 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 RCAN2Q14206 197 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TOMM20Q15388 145 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 UNC50Q53HI1 259 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 ENPP6Q6UWR7 440 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TDRPQ86YL5 185 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 LACC1Q8IV20 430 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 OR5M9Q8NGP3 310 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 TRMOQ9BU70 441 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 ACBD3Q9H3P7 528 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 SDHAF3Q9NRP4 125 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 MAT2BQ9NZL9 334 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 ZNF639Q9UID6 485 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 DLGAP4Q9Y2H0 992 aa11.67□□□□□ -0.54
PDZD11-201ENST00000239666 MRPS18CQ9Y3D5 142 aaKnown RBP11.67□□□□□ -0.54
PDZD11-201ENST00000239666 C15orf38-AP3S2A0A0A6YYH1 394 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 OR6C70A6NIJ9 312 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 COQ9O75208 318 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 TOXO94900 526 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CHEK2O96017 543 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ABCB1P08183 1280 aaPredicted RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 IFI6P09912 130 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 SBK3P0C264 359 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 GLI4P10075 376 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 PRF1P14222 555 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 S1PR1P21453 382 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ADH6P28332 368 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CRHR1P34998 444 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 FEN1P39748 380 aaKnown RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 KIR3DL1P43629 444 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CLK3P49761 638 aaKnown RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CDK9P50750 372 aaKnown RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 DNAJB13P59910 316 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 TLE4Q04727 773 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ZNF763Q0D2J5 394 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 PLCXD2Q0VAA5 305 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 DUSP8Q13202 625 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ZNHIT3Q15649 155 aaPredicted RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 TIGD3Q6B0B8 471 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 IKBIPQ70UQ0 350 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 DMRTC2Q8IXT2 367 aaPredicted RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ULK2Q8IYT8 1036 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CCDC63Q8NA47 563 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ZFP3Q96NJ6 502 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 BBS4Q96RK4 519 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 RHOXF2Q9BQY4 288 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 ZNF559Q9BR84 538 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 CALHM2Q9HA72 323 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 C3orf14Q9HBI5 128 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 MID1IP1Q9NPA3 183 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 MIEF1Q9NQG6 463 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 FARSBQ9NSD9 589 aaKnown RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 TAS2R7Q9NYW3 318 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 KLRF1Q9NZS2 232 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
PDZD11-201ENST00000239666 C15orf41Q9Y2V0 281 aa11.66□□□□□ -0.54
PDZD11-201ENST00000239666 APCP25054 2843 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 ABCA12Q86UK0 2595 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 A0A0G2JMM0 328 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 A0A1W2PPB8 328 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 A0A1W2PRS3 328 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 WASHC1A8K0Z3 465 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 KIR3DP1A8MWS1 328 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 COPEO14579 308 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 PLOD3O60568 738 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 GOSR1O95249 250 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 CLPSP04118 112 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 IGFBP2P18065 325 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 DDCP20711 480 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 CHMP24386 653 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 TIA1P31483 386 aaKnown RBP eCLIP11.65□□□□□ -0.54
PDZD11-201ENST00000239666 PNLIPRP2P54317 469 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 FBXW4P57775 412 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 CEBPEQ15744 281 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 VASNQ6EMK4 673 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 AAGABQ6PD74 315 aa11.65□□□□□ -0.54
PDZD11-201ENST00000239666 ZYG11AQ6WRX3 759 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms