RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 hCG_2039718K7EN88 272 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 FCMRO60667 390 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 CSO75390 466 aaKnown RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 MFN2O95140 757 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 IFI6P09912 130 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 MAP3K8P41279 467 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 TSPAN7P41732 249 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 MAPK10P53779 464 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 CRISP3P54108 245 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 OCA2Q04671 838 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 FUT7Q11130 342 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 ZNF155Q12901 538 aaPredicted RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 ATP6AP1Q15904 470 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 GRAMD1BQ3KR37 738 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 CCNJQ5T5M9 372 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 FAM69BQ5VUD6 431 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 HEPHL1Q6MZM0 1159 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 RAB11FIP2Q7L804 512 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 OVCH1Q7RTY7 1134 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 PATL1Q86TB9 770 aaKnown RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 CDRT4Q8N9R6 151 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 ZG16BQ96DA0 208 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 COL21A1Q96P44 957 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 PHOX2BQ99453 314 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 ULBP3Q9BZM4 244 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 GIN1Q9NXP7 522 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 IFT80Q9P2H3 777 aaPredicted RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 ABCG2Q9UNQ0 655 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 PRAMEF25A6NGN4 478 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 DIRAS1O95057 198 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 ONECUT2O95948 504 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 MT-CO3P00414 261 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 OR1E2P47887 323 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 CHRNEQ04844 493 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 C16orf62Q7Z3J2 963 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 STRADBQ9C0K7 418 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 SLC38A1Q9H2H9 487 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 PIGUQ9H490 435 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 NTN4Q9HB63 628 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 FOLH1BQ9HBA9 442 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 HEMK1Q9Y5R4 338 aaPredicted RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 GXYLT2A0PJZ3 443 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 SAC3D1A6NKF1 404 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 DUXAA6NLW8 204 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 PRKNO60260 465 aaPredicted RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 CAPNS1P04632 268 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 ALOX5P09917 674 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 FCGR1AP12314 374 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 MAGEA2P43356 314 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 PSG6Q00889 435 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 SFT2D3Q587I9 215 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 TSEN54Q7Z6J9 526 aaKnown RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 EPHX4Q8IUS5 362 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 ZDHHC21Q8IVQ6 265 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 ZNF615Q8N8J6 731 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 GPR32P1Q8NGA4 272 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 C16orf52Q8NHV5 167 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 SENP5Q96HI0 755 aaPredicted RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 CIB1Q99828 191 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 PELOQ9BRX2 385 aaKnown RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 OR10A5Q9H207 317 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 BCL2L10Q9HD36 194 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 IL1RAPQ9NPH3 570 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 FBXO34Q9NWN3 711 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 AKAP7Q9P0M2 348 aaPredicted RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 PCDHGA1Q9Y5H4 931 aa17.29■□□□□ 0.36
SNX17-201ENST00000233575 GPC6Q9Y625 555 aaPredicted RBP17.29■□□□□ 0.36
SNX17-201ENST00000233575 IGHV3-20A0A0C4DH32 117 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 IDSB3KWA1 339 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 CLOCKO15516 846 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 COQ9O75208 318 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 LDLRP01130 860 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 CD247P20963 164 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 GALNSP34059 522 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 GABRA3P34903 492 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 IST1P53990 364 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 PPP1R8Q12972 351 aaKnown RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 ATAD3BQ5T9A4 648 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 HES3Q5TGS1 186 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 COMTD1Q86VU5 262 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 METTL25Q8N6Q8 603 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 PLPP5Q8NEB5 264 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 SPPL2AQ8TCT8 520 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 GPR151Q8TDV0 419 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 HOXB13Q92826 284 aaPredicted RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 CENPNQ96H22 339 aaPredicted RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 C7orf34Q96L11 122 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 VSTM2LQ96N03 204 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 SPSB2Q99619 263 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 OR8D2Q9GZM6 311 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 EXD2Q9NVH0 621 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 PISDQ9UG56 409 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 VSTM2BA6NLU5 285 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 CST1P01037 141 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 TXNL4AP83876 142 aaKnown RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 BIKQ13323 160 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 NNATQ16517 81 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 IQCCQ4KMZ1 466 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 ZCCHC12Q6PEW1 402 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms