RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OR2S2Q9NQN1 319 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF451Q9Y4E5 1061 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RHCEP18577 417 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 POU3F2P20265 443 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-201ENST00000225964 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-201ENST00000225964 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 NELL2Q99435 816 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 APOOQ9BUR5 198 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RETREG1Q9H6L5 497 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 SCML1Q9UN30 329 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 SOX3P41225 446 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ACTRT3Q9BYD9 372 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 I3L521 148 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-201ENST00000225964 SYT7O43581 403 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 CERS1P27544 350 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 FXYD4P59646 89 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 PIGFQ07326 219 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ABHD12BQ7Z5M8 362 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 FAM86C1Q9NVL1 165 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 MDFIC2A0A1B0GVS7 189 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 TVP23AA6NH52 213 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 SLC22A31A6NKX4 558 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CLIC3O95833 236 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 MAOBP27338 520 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 PDSS2Q86YH6 399 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 RRNAD1Q96FB5 475 aaKnown RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 UHRF1Q96T88 793 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF160Q9HCG1 818 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ACTR10Q9NZ32 417 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 VDAC3Q9Y277 283 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 KAT6AQ92794 2004 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CTSAP10619 480 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CLDN2P57739 230 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 OR4D1Q15615 310 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 LILRB2Q8N423 598 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 SLC5A8Q8N695 610 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 PCDHGA8Q9Y5G5 932 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ABCC6O95255 1503 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF705EA8MWA4 302 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 SUOXP51687 545 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 S100A12P80511 92 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 NTRK2Q16620 822 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 UNC50Q53HI1 259 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ZFP41Q8N8Y5 198 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 FBXL8Q96CD0 374 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CDCA3Q99618 268 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 CUEDC1Q9NWM3 386 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 PRAMEF26H0Y7S4 382 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 TNFSF12O43508 249 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 UCHL1P09936 223 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 PYCR1P32322 319 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 COL28A1Q2UY09 1125 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 LMF1Q96S06 567 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ANKRD30BLA7E2S9 258 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 FAM171A2A8MVW0 826 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 S1PR4O95977 384 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 EEF1A1P68104 462 aaKnown RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ATP6AP1Q15904 470 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-201ENST00000225964 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
COL1A1-201ENST00000225964 OXSR1O95747 527 aaPredicted RBP12.57□□□□□ -0.4
COL1A1-201ENST00000225964 RAB4BP61018 213 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 PLBD1Q6P4A8 553 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 HCFC1R1Q9NWW0 138 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 A0A0J9YY10 115 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 F5H5K5 113 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 FMO6PO60774 539 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 H2AFB2P0C5Z0 115 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 OR7A5Q15622 319 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 NDUFAF5Q5TEU4 345 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 KANK2Q63ZY3 851 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 OR6C4Q8NGE1 309 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 OR52N2Q8NGI0 321 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 FAM71F1Q96KD3 344 aaPredicted RBP12.57□□□□□ -0.4
COL1A1-201ENST00000225964 CDC6Q99741 560 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 POLE4Q9NR33 117 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 SLC39A1Q9NY26 324 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 ANKMY1Q9P2S6 941 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 TRBV11-1A0A0K0K1C0 115 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 ARGFXA6NJG6 315 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 PCDH17O14917 1159 aa12.57□□□□□ -0.4
COL1A1-201ENST00000225964 TBX10O75333 385 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms