RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ALOXE3Q9BYJ1 711 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 AMBRA1Q9C0C7 1298 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 PIGUQ9H490 435 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 UBAP1Q9NZ09 502 aa16.95■□□□□ 0.3
VIM-201ENST00000224237 DHCR7Q9UBM7 475 aaKnown RBP16.95■□□□□ 0.3
VIM-201ENST00000224237 DSPPQ9NZW4 1301 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 IGHV5-10-1A0A0J9YXX1 117 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 A0A1B0GX78 115 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 NME6O75414 186 aaPredicted RBP16.94■□□□□ 0.3
VIM-201ENST00000224237 ALBP02768 609 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 CHN2P52757 468 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 BTG2P78543 158 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 DSG2Q14126 1118 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 SERTAD2Q14140 314 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 DUSP5Q16690 384 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
VIM-201ENST00000224237 PRAMEF17Q5VTA0 474 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 CYGBQ8WWM9 190 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 CDS1Q92903 461 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 RNF31Q96EP0 1072 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 STACQ99469 402 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 PELOQ9BRX2 385 aaKnown RBP16.94■□□□□ 0.3
VIM-201ENST00000224237 SLC38A1Q9H2H9 487 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 SMURF2Q9HAU4 748 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 DUSP22Q9NRW4 184 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 C3orf18Q9UK00 162 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 FAM32AQ9Y421 112 aaKnown RBP16.94■□□□□ 0.3
VIM-201ENST00000224237 CLDN16Q9Y5I7 305 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 ENPP4Q9Y6X5 453 aa16.94■□□□□ 0.3
VIM-201ENST00000224237 CACNA1HO95180 2353 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 H0YAE9 185 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 RECKO95980 971 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ALOX5P09917 674 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ZNF883P0CG24 379 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ACP2P11117 423 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 RHCEP18577 417 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 CAPGP40121 348 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 STT3AP46977 705 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 OR1D4P47884 311 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.33e-10■■□□□ 11.8
VIM-201ENST00000224237 RFX4Q33E94 735 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ARHGAP11BQ3KRB8 267 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ZNF578Q96N58 590 aaPredicted RBP16.93■□□□□ 0.3
VIM-201ENST00000224237 SRPK3Q9UPE1 567 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 SATB2Q9UPW6 733 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 MMACHCQ9Y4U1 282 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ORC6Q9Y5N6 252 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 CCDC88CQ9P219 2028 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 A8MVJ9 347 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 KHNYNO15037 678 aaKnown RBP16.93■□□□□ 0.3
VIM-201ENST00000224237 HS6ST1O60243 411 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 SOX30O94993 753 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 CBX7O95931 251 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 MAOAP21397 527 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 PRKACGP22612 351 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 SPIBQ01892 262 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 GK3PQ14409 553 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 EXOSC7Q15024 291 aaKnown RBP16.93■□□□□ 0.3
VIM-201ENST00000224237 MLIPQ5VWP3 458 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 KRT80Q6KB66 452 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 DGAT2L6Q6ZPD8 337 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 OLIG3Q7RTU3 272 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 RCBTB1Q8NDN9 531 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 OR52R1Q8NGF1 315 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 DOK4Q8TEW6 326 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 CCDC74BQ96LY2 380 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 PIP5K1AQ99755 562 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 PINK1Q9BXM7 581 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 ZNF304Q9HCX3 659 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 LANCL2Q9NS86 450 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 PDP1Q9P0J1 537 aaPredicted RBP16.93■□□□□ 0.3
VIM-201ENST00000224237 TESMINQ9Y4I5 508 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 LYVE1Q9Y5Y7 322 aa16.93■□□□□ 0.3
VIM-201ENST00000224237 TNFRSF11BO00300 401 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 AK1P00568 194 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 ALPPP05187 535 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 FBLP22087 321 aaKnown RBP16.92■□□□□ 0.3
VIM-201ENST00000224237 MYF6P23409 242 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 GALNSP34059 522 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 PDX1P52945 283 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 RAD23AP54725 363 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 CHRNEQ04844 493 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 ZNF605Q86T29 641 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 CHDHQ8NE62 594 aaPredicted RBP16.92■□□□□ 0.3
VIM-201ENST00000224237 C7orf57Q8NEG2 295 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 GFM1Q96RP9 751 aaKnown RBP16.92■□□□□ 0.3
VIM-201ENST00000224237 RSPO3Q9BXY4 272 aaPredicted RBP16.92■□□□□ 0.3
VIM-201ENST00000224237 TRIM45Q9H8W5 580 aaPredicted RBP16.92■□□□□ 0.3
VIM-201ENST00000224237 SLC9A8Q9Y2E8 581 aa16.92■□□□□ 0.3
VIM-201ENST00000224237 ZNF318Q5VUA4 2279 aa16.91■□□□□ 0.3
VIM-201ENST00000224237 GALR2O43603 387 aaPredicted RBP16.91■□□□□ 0.3
VIM-201ENST00000224237 JRKO75564 520 aa16.91■□□□□ 0.3
VIM-201ENST00000224237 PABPC4LP0CB38 370 aaKnown RBP16.91■□□□□ 0.3
VIM-201ENST00000224237 S1PR1P21453 382 aa16.91■□□□□ 0.3
VIM-201ENST00000224237 MAP3K8P41279 467 aa16.91■□□□□ 0.3
VIM-201ENST00000224237 GRK6P43250 576 aa16.91■□□□□ 0.3
VIM-201ENST00000224237 YAP1P46937 504 aaKnown RBP16.91■□□□□ 0.3
VIM-201ENST00000224237 ADARB1P78563 741 aaKnown RBP16.91■□□□□ 0.3
VIM-201ENST00000224237 LAPTM4AQ15012 233 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms