RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CT45A8P0DMV1 189 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 CT45A9P0DMV2 189 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 LBPP18428 481 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 DRD5P21918 477 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 GPC1P35052 558 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 FRKP42685 505 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 PPICP45877 212 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 PPP2R2AP63151 447 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 HSF1Q00613 529 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 PLGLB1Q02325 96 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 PLCXD2Q0VAA5 305 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 MAD2L1Q13257 205 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 CT45A2Q5DJT8 189 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 CPTPQ5TA50 214 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 NPSR1Q6W5P4 371 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 LARP4Q71RC2 724 aaKnown RBP eCLIP11.66□□□□□ -0.544e-10■□□□□ 10.7
LSM5-201ENST00000223084 SLC44A2Q8IWA5 706 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 RIMKLAQ8IXN7 391 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 OR2L13Q8N349 312 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 POGLUT1Q8NBL1 392 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 OR4N2Q8NGD1 307 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 ZFP28Q8NHY6 868 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 TMBIM1Q969X1 311 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 MTERF3Q96E29 417 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 ZBED6CLQ96FA7 236 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 VSTM2LQ96N03 204 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 GPR137Q96N19 417 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 BTBD9Q96Q07 612 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 FAM173AQ9BQD7 235 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 DDX18Q9NVP1 670 aaKnown RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 ASIC5Q9NY37 505 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 TAS2R9Q9NYW1 312 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 CNOT11Q9UKZ1 510 aaKnown RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 NCKAP5O14513 1909 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 CAPN14A8MX76 684 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 TO15178 435 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 ASNA1O43681 348 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 COQ9O75208 318 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 PPM1BO75688 479 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 PRPS1L1P21108 318 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 EPHA3P29320 983 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 RPL3P39023 403 aaKnown RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 PRKAG1P54619 331 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 NME5P56597 212 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 CLDN8P56748 225 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 DCAF7P61962 342 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 PPIAP62937 165 aaKnown RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 FOXO1Q12778 655 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 SMU1Q2TAY7 513 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 PGS1Q32NB8 556 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 SLC9B1Q4ZJI4 515 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 GK5Q6ZS86 529 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 MAVSQ7Z434 540 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 SLC34A3Q8N130 599 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 FBXW8Q8N3Y1 598 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 SPPL2AQ8TCT8 520 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 LRRC8CQ8TDW0 803 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 DIO2Q92813 273 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 HGDQ93099 445 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 COQ8BQ96D53 544 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 HSPBAP1Q96EW2 488 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 TTTY12Q9BZ98 90 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 DEFB127Q9H1M4 99 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 SLCO1B3Q9NPD5 702 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 EQTNQ9NQ60 294 aa11.65□□□□□ -0.54
LSM5-201ENST00000223084 ACSS1Q9NUB1 689 aaPredicted RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.65□□□□□ -0.54
LSM5-201ENST00000223084 UQCRHLA0A096LP55 91 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 A0A1W2PRB8 838 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 CLEC18AA5D8T8 446 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 TRPC5OSA6NMA1 111 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 TP53I11O14683 189 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 ACOX3O15254 700 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
LSM5-201ENST00000223084 UGT2B11O75310 529 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 REM1O75628 298 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 PDE9AO76083 593 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 GLSO94925 669 aaPredicted RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 SLITRK5O94991 958 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 PSMG1O95456 288 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 C6orf47O95873 294 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 ALDOCP09972 364 aaKnown RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 TMED10P49755 219 aaKnown RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 KCNJ2P63252 427 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 PSG6Q00889 435 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
LSM5-201ENST00000223084 KRTCAP3Q53RY4 240 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 CMPK2Q5EBM0 449 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 NXNQ6DKJ4 435 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 CLEC18BQ6UXF7 455 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 SZRD1Q7Z422 152 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
LSM5-201ENST00000223084 TMEM251Q8N6I4 163 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms