RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ST7LQ8TDW4 575 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 PGAP3Q96FM1 320 aaPredicted RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 FEVQ99581 238 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ABRACLQ9P1F3 81 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 RANP62826 216 aaKnown RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TARBP2Q15633 366 aaKnown RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 NOX3Q9HBY0 568 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 HPGDSO60760 199 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 KCNJ13O60928 360 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 CAV2P51636 162 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ZNF695Q8IW36 515 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 FBXO15Q8NCQ5 510 aaPredicted RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 LFNGQ8NES3 379 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ADAMTS14Q8WXS8 1223 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 FAM83CQ9BQN1 747 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 RHCGQ9UBD6 479 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3DA0A087WVF3 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3IA0A087WXS9 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3EA0A087X179 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3LB9A6J9 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 SYN3O14994 580 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 SYPP08247 313 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3HP0C7X1 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 IMPA1P29218 277 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3CQ6IPX1 549 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ENPP6Q6UWR7 440 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TBC1D3Q8IZP1 549 aaPredicted RBP13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 OR5T1Q8NG75 326 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 ACDQ96AP0 544 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TTPALQ9BTX7 342 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 OR2AG1Q9H205 316 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 OPA3Q9H6K4 179 aa13.09□□□□□ -0.31
SIPA1L3-201ENST00000222345 TGOLN2O43493 480 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 GPR137BO60478 399 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 CRHBPP24387 322 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 UGCGQ16739 394 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 BCL7AQ4VC05 210 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 NRG4Q8WWG1 115 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 TMEM234Q8WY98 164 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 KCNA7Q96RP8 456 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 C12orf57Q99622 126 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 FGFBP2Q9BYJ0 223 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.31
SIPA1L3-201ENST00000222345 ARVCFO00192 962 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SEC14L5O43304 696 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 PLEKHS1Q5SXH7 462 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 ESAMQ96AP7 390 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SLC43A1O75387 559 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 FAM111BQ6SJ93 734 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 OR6V1Q8N148 313 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 C17orf62Q9BQA9 187 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 OR11A1Q9GZK7 315 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 RAB9BQ9NP90 201 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 HES2Q9Y543 173 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 PCDHGA7Q9Y5G6 932 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 A0A087WZY1 265 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 VSTM5A8MXK1 200 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 AK4P27144 223 aaPredicted RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 RBMS3Q6XE24 437 aaKnown RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SLC9B2Q86UD5 537 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 FHP07954 510 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 NAT1P18440 290 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 ARL2P36404 184 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 PSPHP78330 225 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 BRAT1Q6PJG6 821 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 TSSK4Q6SA08 328 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 RANBP9Q96S59 729 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SLC16A5O15375 505 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 CAPNS1P04632 268 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 GNB3P16520 340 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 PTBP1P26599 531 aaKnown RBP eCLIP13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 FABP6P51161 128 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 AKR1C2P52895 323 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SCAPQ12770 1279 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 PLA2G7Q13093 441 aa13.08□□□□□ -0.32
SIPA1L3-201ENST00000222345 SERINC3Q13530 473 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms