RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 EHD1Q9H4M9 534 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CUTCQ9NTM9 273 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TRBV2A0A0J9YWF9 115 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SYT7O43581 403 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SIGLEC6O43699 453 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 ALDOBP05062 364 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 BPIP17213 487 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CRABP1P29762 137 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PYCR1P32322 319 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 HMGCLP35914 325 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PITPNBP48739 271 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PRKXP51817 358 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 DIO3P55073 304 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 BCL2A1Q16548 175 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 VHLLQ6RSH7 139 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 S100A7AQ86SG5 101 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 OR52E2Q8NGJ4 325 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 GLYATL2Q8WU03 294 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 WACQ9BTA9 647 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 NANOGQ9H9S0 305 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MLXQ9UH92 298 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TMEM184BQ9Y519 407 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CICQ96RK0 1608 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 F5H5K5 113 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 OR2T1O43869 369 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 EIF4EP06730 217 aaKnown RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PNMTP11086 282 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CKMT2P17540 419 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CELP19835 753 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 ACVR1BP36896 505 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 IGFN1Q86VF2 1251 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SECISBP2Q96T21 854 aaKnown RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 GAREM1Q9H706 876 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PLEK2Q9NYT0 353 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SCRG1O75711 98 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 CCL11P51671 97 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 MLF2Q15773 248 aaPredicted RBP10.02□□□□□ -0.8
TRPS1-201ENST00000220888 SPATS1Q496A3 300 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 C6orf136Q5SQH8 315 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 DCAF12L1Q5VU92 463 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 AWAT2Q6E213 333 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.8
TRPS1-201ENST00000220888 TMEM178AQ8NBL3 297 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 CHPT1Q8WUD6 406 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 ARRDC3Q96B67 414 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 PCYT2Q99447 389 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.8
TRPS1-201ENST00000220888 SYT4Q9H2B2 425 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 AGPAT4Q9NRZ5 378 aa10.02□□□□□ -0.8
TRPS1-201ENST00000220888 ZNF487B1APH4 448 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 SGK494L7N484 410 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 AQP9O43315 295 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 IFNA7P01567 189 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 HOXC13P31276 330 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 AQP4P55087 323 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 DNAJB13P59910 316 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 PQLC3Q8N755 202 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 CDRT4Q8N9R6 151 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 OR9I1Q8NGQ6 314 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 TOX2Q96NM4 488 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 POTEKPQ9BYX7 375 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 hCG_1809904A0A1W2PP81 198 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 A0A1W2PPE2 198 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 A0A1W2PR64 198 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 A0A1W2PRV1 198 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 SHISA7A6NL88 538 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 OR52A4PA6NMU1 304 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 PDLIM1O00151 329 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 UBL4AP11441 157 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 AFF3P51826 1226 aaKnown RBP10.02□□□□□ -0.81
TRPS1-201ENST00000220888 RABL3Q5HYI8 236 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 NDUFAF5Q5TEU4 345 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 ATG9BQ674R7 924 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 MTFR2Q6P444 385 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 GPRIN1Q7Z2K8 1008 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 TSPAN33Q86UF1 283 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 ASB12Q8WXK4 309 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 MTG2Q9H4K7 406 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 EBF2Q9HAK2 575 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 TMEM100Q9NV29 134 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.81
TRPS1-201ENST00000220888 SLC6A14Q9UN76 642 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 A0A0G2JPF8 293 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 HNRNPCL3B7ZW38 293 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 SLC19A2O60779 497 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 ZNF888P0CJ79 500 aaPredicted RBP10.02□□□□□ -0.81
TRPS1-201ENST00000220888 HNRNPCL4P0DMR1 293 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 S100PP25815 95 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 GABRA2P47869 451 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 CSNK1EP49674 416 aaKnown RBP10.02□□□□□ -0.81
TRPS1-201ENST00000220888 RPS26P62854 115 aaKnown RBP10.02□□□□□ -0.81
TRPS1-201ENST00000220888 VMACQ2NL98 169 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 MORN1Q5T089 497 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
TRPS1-201ENST00000220888 CEACAM19Q7Z692 300 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms