RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 A3GALT2U3KPV4 340 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SEC16AO15027 2179 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 A0A1B0GVC2 190 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 GSAPA4D1B5 854 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 ZNF860A6NHJ4 632 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 A6NIN4 97 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 CASKO14936 926 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SLC16A1P53985 500 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SEC13P55735 322 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 RACK1P63244 317 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 ELOAQ14241 798 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 NCF4Q15080 339 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 MLF2Q15773 248 aaPredicted RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 C12orf73Q69YU5 71 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SMARCD3Q6STE5 483 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 PRICKLE2Q7Z3G6 844 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SHISA5Q8N114 240 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 ACOT4Q8N9L9 421 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 PROKR2Q8NFJ6 384 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 OR52P1PQ8NH57 321 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 WDR26Q9H7D7 661 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 PRSS16Q9NQE7 514 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 N6AMT1Q9Y5N5 214 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 CSNK1G3Q9Y6M4 447 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 C1QTNF3-AMACRE9PGA6 284 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 ZNF670-ZNF695F2Z2N8 137 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 DVL2O14641 736 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SEMA3DO95025 777 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SLC2A10O95528 541 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 GNSP15586 552 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 FUT1P19526 365 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 APEX1P27695 318 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 SNRPGP62308 76 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 TOR1AIP1Q5JTV8 583 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 SLC35F1Q5T1Q4 408 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 PIP5KL1Q5T9C9 394 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 METRNLQ641Q3 311 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 C16orf62Q7Z3J2 963 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 RAB43Q86YS6 212 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 NKAIN4Q8IVV8 208 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 TMEFF1Q8IYR6 380 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 OR2A1Q8NGT9 310 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 CHFRQ96EP1 664 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 DCLRE1CQ96SD1 692 aaKnown RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 PLXNA2O75051 1894 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 LRIT2A6NDA9 550 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 LALBAP00709 142 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 TP53P04637 393 aaPredicted RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 RFX2P48378 723 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 TAS2R38P59533 333 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 REEP5Q00765 189 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 IFITM2Q01629 132 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 TBRG1Q3YBR2 411 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 CCNJQ5T5M9 372 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 HDDC3Q8N4P3 179 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 KCT2Q8NC54 265 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 ZNF707Q96C28 371 aaPredicted RBP7.8□□□□□ -1.16
CDC27-201ENST00000066544 CAMK1GQ96NX5 476 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 CLCA3PQ9Y6N3 262 aa7.8□□□□□ -1.16
CDC27-201ENST00000066544 AIFM1O95831 613 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 RPN2P04844 631 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 RGS8P57771 180 aaPredicted RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 SMIM11AP58511 58 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 CD83Q01151 205 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 PRDX1Q06830 199 aaKnown RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 FUT5Q11128 374 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 LRRC32Q14392 662 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 HSDL2Q6YN16 418 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 BBS1Q8NFJ9 593 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 MRPS30Q9NP92 439 aaKnown RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 PLSCR3Q9NRY6 295 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 CMAHPQ9Y471 501 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 V9GYH0 126 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 ZC3H12DA2A288 527 aaKnown RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 GRXCR1A8MXD5 290 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 RAB36O95755 333 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 HTR3AP46098 478 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 LIMK1P53667 647 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 ATAD3CQ5T2N8 411 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 ATP6V1C2Q8NEY4 427 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 OR4E2Q8NGC2 313 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 TP53INP1Q96A56 240 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 LINC00615Q96LM1 132 aaPredicted RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 FYTTD1Q96QD9 318 aaKnown RBP7.79□□□□□ -1.16
CDC27-201ENST00000066544 CTRCQ99895 268 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 YIPF2Q9BWQ6 316 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 FAIM2Q9BWQ8 316 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 TTTY10Q9BZA0 68 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 CD8B2A6NJW9 211 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 A8MVJ9 347 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 NFATC1O95644 943 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 CD8BP10966 210 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 CDH11P55287 796 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 PSPHP78330 225 aa7.79□□□□□ -1.16
CDC27-201ENST00000066544 DPTQ07507 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms