RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SMIM28A0A1B0GU29 152 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TLX2O43763 284 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 DIRAS1O95057 198 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 DLDP09622 509 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SBK2P0C263 348 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MLLT10P55197 1068 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 DAOAP59103 153 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 HTD2P86397 168 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OGFOD2Q6N063 350 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LDB1Q86U70 411 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SAPCD2Q86UD0 394 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NRROSQ86YC3 692 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RNF113BQ8IZP6 322 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LILRB2Q8N423 598 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 VGLL2Q8N8G2 317 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ELP4Q96EB1 424 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 C12orf42Q96LP6 360 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 COQ10AQ96MF6 247 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SERINC2Q96SA4 455 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZCCHC4Q9H5U6 513 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ISYNA1Q9NPH2 558 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC39A9Q9NUM3 307 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 A0A1W2PQH9 124 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 OR6C74A6NCV1 312 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 C4orf47A7E2U8 309 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 ADRB2P07550 413 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 HNRNPA1P09651 372 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SPATA31C1P0DKV0 1188 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 ADH5P11766 374 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 BPIP17213 487 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 GSK3BP49841 420 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 DUSP7Q16829 419 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 LPCAT4Q643R3 524 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 VWA5B2Q8N398 1253 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 UBE2J1Q9Y385 318 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PLXNB1O43157 2135 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 A0A0G2JLW4 131 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SCGB1D2O95969 90 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 BMI1P35226 326 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SLBPQ14493 270 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 DACT2Q5SW24 774 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SLC46A3Q7Z3Q1 461 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MARCH9Q86YJ5 346 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 KCNRGQ8N5I3 272 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SEMA6DQ8NFY4 1073 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MS4A4EQ96PG1 132 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SOX17Q9H6I2 414 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PRMT8Q9NR22 394 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TLR9Q9NR96 1032 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 HSFX1Q9UBD0 423 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MGAT4CQ9UBM8 478 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 FAM221BA6H8Z2 402 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CDRT1O95170 752 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 AKAIN1P0CW23 69 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 HOXC13P31276 330 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CTHP32929 405 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 RBPJQ06330 500 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TGFBIQ15582 683 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 ZMAT1Q5H9K5 638 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CLEC6AQ6EIG7 209 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 KIAA1211LQ6NV74 962 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 DTX3Q8N9I9 347 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TMED9Q9BVK6 235 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 DTLQ9NZJ0 730 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PCTPQ9UKL6 214 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PLEKHM1Q9Y4G2 1056 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 COL11A1P12107 1806 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 GGT3PA6NGU5 568 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 A8MVJ9 347 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MAN2B1O00754 1011 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 AURKAO14965 403 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PLSCR1O15162 318 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 ITM2AO43736 263 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 IL33O95760 270 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SPP1P10451 314 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 GGT2P36268 569 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MBLAC2Q68D91 279 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TSSK4Q6SA08 328 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MOB1BQ7L9L4 216 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CD163Q86VB7 1156 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PHTF2Q8N3S3 785 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 NHLRC2Q8NBF2 726 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CPEB3Q8NE35 698 aaKnown RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 FRS2Q8WU20 508 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 THEM6Q8WUY1 208 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 DAZAP1Q96EP5 407 aaKnown RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 C19orf43Q9BQ61 176 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CLSTN3Q9BQT9 956 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MTHFD2LQ9H903 347 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CCDC85CA6NKD9 419 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM88BA6NKF7 163 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 GPR39O43194 453 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM63AO94886 807 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 KCNK2O95069 426 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CXCL14O95715 111 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CRADDP78560 199 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 MFGE8Q08431 387 aaPredicted RBP5.8□□□□□ -1.48
VPS13D-201ENST00000011700 CDNFQ49AH0 187 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 SH3D19Q5HYK7 790 aa5.8□□□□□ -1.48
VPS13D-201ENST00000011700 PXDC1Q5TGL8 231 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms