RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Unc5dQ8K1S2 956 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 CipcQ8R0W1 432 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1317Q8VF84 316 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr722Q8VFC8 308 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hrh4Q91ZY2 391 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tram2Q924Z5 370 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sfxn2Q925N2 322 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Asic5Q9R0Y1 495 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 1700017D01RikG5E851 209 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm14496K7N5U4 849 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r117K7N6V1 857 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PipP02816 146 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Apoc1P34928 88 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Kcnn3P58391 732 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 TefmQ5SSK3 364 aaKnown RBP9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm5346Q7M766 736 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sf3b4Q8QZY9 424 aaKnown RBP9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Med9Q8VCS6 142 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr357Q8VFP4 308 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm8797A0A0A6YW67 77 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ackr2O08707 378 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 UbbP0CG49 305 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 UbcP0CG50 734 aaKnown RBP9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cst3P21460 140 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rps27aP62983 156 aaKnown RBP9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Uba52P62984 128 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cfhr2Q4LDF6 332 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sox19Q62249 55 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Arl11Q6P3A9 176 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ticam1Q80UF7 732 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cldn19Q9ET38 224 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Spo11Q9WTK8 396 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Obp1bA2AEP0 171 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm12695A2AGB2 545 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm14743A2BHD2 171 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 4930595D18RikD3Z642 64 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r94E9PZK8 818 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp989H3BLB0 661 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Agtr1bP29755 359 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fv1P70213 459 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tpgs2Q66JT5 296 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 WdcpQ6NV72 663 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q6P1I3 445 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q8BZE1 841 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Katnal1Q8K0T4 488 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr382Q8VF79 312 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr821Q8VG45 310 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Coro6Q920M5 471 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Med30Q9CQI9 178 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cyp2d22Q9JKY7 500 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Padi3Q9Z184 664 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AdaP03958 352 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pde12Q3TIU4 608 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nadsyn1Q711T7 725 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp324Q78F42 583 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc7a6Q8BGK6 515 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pced1bQ8BGX1 433 aaKnown RBP9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 ChdhQ8BJ64 596 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ly6g5cQ8K1T5 149 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gpr146Q99LE2 333 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pmepa1Q9D7R2 260 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gfra4Q9JJT2 260 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sipa1l1Q8C0T5 1782 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm6133B2RY53 190 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r12G5E8G1 307 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PrnpP04925 254 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slurp2P0DP59 97 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 HexaP29416 528 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr285Q7TS17 319 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zc3hav1lQ8BFR1 296 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ncr1Q8C567 325 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pdcd2lQ8C5N5 364 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr48Q8VGN4 301 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dhrs7Q9CXR1 338 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Creb3l4Q9D2A5 370 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nrip3Q9JJR9 240 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cldn7Q9Z261 211 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Robo3Q9Z2I4 1366 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr239A0PK55 315 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Amd2D3Z6H8 334 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r48E9Q5D8 855 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dcdc2bF7BCK0 340 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 FaimlJ3QPY3 178 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr55K7N6Q1 315 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Amd1P0DMN7 334 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Kcne1P23299 129 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Adamts19P59509 1210 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Wdr5P61965 334 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ddhd2Q80Y98 699 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r192Q8K4C9 300 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr103Q920Y8 313 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 BambiQ9D0L6 260 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 NaaaQ9D7V9 362 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prss52Q9D9M0 321 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PrelpQ9JK53 378 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Clcf1Q9QZM3 225 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lrrc72A0A1Y7VMI0 288 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 4930402F06RikA2AUQ8 332 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fpr-s1O08790 351 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 SpibO35906 267 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms