RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dhcr24Q8VCH6 516 aaKnown RBP17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr551Q8VG23 315 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rab28Q99KL7 221 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 CenpnQ9CZW2 337 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Zfp84Q9D654 559 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Izumo2Q9DA16 220 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Clec1bQ9JL99 229 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Dclk1Q9JLM8 756 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Nfkb2Q9WTK5 899 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 BC025446A0A087WQT1 134 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 TprnA2AI08 749 aaKnown RBP17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gm5475D3YV11 175 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gm10799F7C7U2 104 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gm8108K7N734 216 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ppm1bP36993 390 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Nat1P50294 290 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Btbd3P58545 530 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Taf1aP97357 453 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cep44Q5HZK1 386 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Hyal5Q812F3 526 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Poldip3Q8BG81 420 aaKnown RBP17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Slc25a24Q8BMD8 475 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Lysmd4Q8CC84 293 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ppwd1Q8CEC6 646 aaKnown RBP17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tbc1d14Q8CGA2 694 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Noxo1Q8VCM2 349 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr535Q8VGL3 312 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Prdm9Q96EQ9 843 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fam45aQ9D8N2 357 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tvp23bQ9D8T4 205 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Aif1lQ9EQX4 150 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Bloc1s6Q9R0C0 172 aa17.73■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 D3Ertd254eA0A0G2JEM5 796 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Zfp811A0A0J9YU71 552 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ect2lA0A140LIP2 953 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cd300cA2A7V7 229 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 H2-T24F8VQG4 363 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ephb6O08644 1014 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Dnajb3O35723 242 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rem1O35929 297 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tp63O88898 680 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cdh3P10287 822 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 TyrP11344 533 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Copz1P61924 177 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cct3P80318 545 aaKnown RBP17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fezf1Q0VDQ9 475 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Myl12bQ3THE2 172 aaKnown RBP17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Irf4Q64287 450 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Enpp3Q6DYE8 874 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Slitrk5Q810B7 957 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 C8bQ8BH35 589 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 PpcdcQ8BZB2 204 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Wdr26Q8C6G8 641 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ash2lQ91X20 623 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fam166aQ9D4K5 319 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gpr88Q9EPB7 384 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cts6Q9ET52 334 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fam217bA2AJW5 387 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr640E9Q7P5 314 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gm21319F6YNI8 144 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 C1dO35473 141 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Psmb5O55234 264 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 RngttO55236 597 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 DcnP28654 354 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 AboP38649 332 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 EvlP70429 414 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Scrn3Q3TMH2 418 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Taar2Q5QD17 339 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tlx2Q61663 284 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 PeloQ80X73 385 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Slc3a1Q91WV7 685 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Pbx4Q99NE9 378 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Pfn3Q9DAD6 137 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Slc23a2Q9EPR4 648 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 CcniQ9Z2V9 377 aa17.72■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 1700023F06RikA2AB62 382 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr1040A2ARY1 313 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Lcn11A2BHR2 178 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rnf217D3YYI7 515 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Atp6ap1lD3Z5W0 336 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 GmlE9PX31 176 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 CyctP00015 105 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cdk1P11440 297 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Guca1aP43081 202 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 IgfalsP70389 603 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Arntl2Q2VPD4 579 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Nsg1Q62092 185 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Chrnb3Q8BMN3 464 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fam46bQ8C152 427 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rae1Q8C570 368 aaKnown RBP17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tmem163Q8C996 288 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Zdhhc5Q8VDZ4 715 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rpe65Q91ZQ5 533 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Spaca1Q9DA48 305 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Pla2g12aQ9EPR2 192 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tlr4Q9QUK6 835 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Orc6Q9WUJ8 262 aa17.71■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tcp10cE9Q046 482 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Opn1swP51491 346 aa17.71■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ugt8Q64676 541 aa17.71■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms