RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CNOT11Q9UKZ1 510 aaKnown RBP13.83□□□□□ -0.2
PHGDH-231ENST00000641939 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.83□□□□□ -0.2
PHGDH-231ENST00000641939 PHF3Q92576 2039 aaKnown RBP13.82□□□□□ -0.2
PHGDH-231ENST00000641939 MYO1GB0I1T2 1018 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 PDE9AO76083 593 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 ESRRAP11474 423 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-231ENST00000641939 TACR1P25103 407 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 ABCD3P28288 659 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 ARRB2P32121 409 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 SERPINB4P48594 390 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 FBXW4P57775 412 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 DCAF7P61962 342 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 PRSS53Q2L4Q9 553 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 UGT3A2Q3SY77 523 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 TNFAIP8L3Q5GJ75 292 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 TBCELQ5QJ74 424 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 ARHGAP11AQ6P4F7 1023 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 DOLPP1Q86YN1 238 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 PRR22Q8IZ63 422 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 FAM109AQ8N4B1 249 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 OR6Y1Q8NGX8 325 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 DIO2Q92813 273 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 EGLN2Q96KS0 407 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 SECISBP2Q96T21 854 aaKnown RBP13.82□□□□□ -0.2
PHGDH-231ENST00000641939 PROK2Q9HC23 129 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 ZFP64Q9NPA5 681 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 BOKQ9UMX3 212 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-231ENST00000641939 EXO1Q9UQ84 846 aaKnown RBP13.82□□□□□ -0.2
PHGDH-231ENST00000641939 TMED5Q9Y3A6 229 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 CRYBG3Q68DQ2 2970 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 CACNA1DQ01668 2161 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 NOTCH2Q04721 2471 aa13.82□□□□□ -0.2
PHGDH-231ENST00000641939 NUP214P35658 2090 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ANKRD33BA6NCL7 494 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PIP5K1BO14986 540 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 LSM1O15116 133 aaKnown RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 TM9SF1O15321 606 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PLOD3O60568 738 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ERLIN1O75477 346 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PPM1BO75688 479 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 LRATO95237 230 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ABCB1P08183 1280 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 NAGAP17050 411 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 NTSP30990 170 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 MAGEA5P43359 124 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PPICP45877 212 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 NCBP2P52298 156 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 RPL38P63173 70 aaKnown RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 RPP38P78345 283 aaKnown RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 NNATQ16517 81 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 GALNTL6Q49A17 601 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 HIST2H2BCQ6DN03 193 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 LRIG3Q6UXM1 1119 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 RPTNQ6XPR3 784 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 EID3Q8N140 333 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PPP1R14CQ8TAE6 165 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 FAM57AQ8TBR7 257 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 SPPL2AQ8TCT8 520 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 AGR3Q8TD06 166 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ITLN2Q8WWU7 325 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 PHF12Q96QT6 1004 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 CCT7Q99832 543 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 DOHHQ9BU89 302 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 STMN4Q9H169 189 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ANKRA2Q9H9E1 313 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ZDHHC2Q9UIJ5 367 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 GPR55Q9Y2T6 319 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-231ENST00000641939 MEMO1Q9Y316 297 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
PHGDH-231ENST00000641939 ATP6AP2A0A1C7CYW4 349 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 FRG2CA6NGY1 282 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 TO15178 435 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 BIRC5O15392 142 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 ATP6AP2O75787 350 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 SLITRK5O94991 958 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 IGHG3P01860 377 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 JUNP05412 331 aaKnown RBP13.8□□□□□ -0.2
PHGDH-231ENST00000641939 TPOP07202 933 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 MYZAPP0CAP1 466 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 SDC1P18827 310 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 DRD5P21918 477 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 PLCXD2Q0VAA5 305 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 SLC10A1Q14973 349 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 RFTN2Q52LD8 501 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-231ENST00000641939 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 MRGPRGQ86SM5 289 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 CD163Q86VB7 1156 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 OR7G2Q8NG99 324 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 GFM2Q969S9 779 aaKnown RBP13.8□□□□□ -0.2
PHGDH-231ENST00000641939 ZBTB9Q96C00 473 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 OMA1Q96E52 524 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 PGM2Q96G03 612 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 JSRP1Q96MG2 331 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-231ENST00000641939 RILPQ96NA2 401 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 BTBD9Q96Q07 612 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 GLIPR2Q9H4G4 154 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 TAS2R9Q9NYW1 312 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms