RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 966 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-233	ENST00000641487	PSME2	Q9UL46	239 aa		5.37	□□□□□ -1.55
CASC19-233	ENST00000641487	RNF114	Q9Y508	228 aa		5.37	□□□□□ -1.55
CASC19-233	ENST00000641487	MRPS18B	Q9Y676	258 aa	Known RBP	5.37	□□□□□ -1.55
CASC19-233	ENST00000641487	SPACA6	W5XKT8	324 aa		5.37	□□□□□ -1.55
CASC19-233	ENST00000641487	SDK2	Q58EX2	2172 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487		A0A0B4J293	547 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	WIPF3	A6NGB9	483 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CGB1	A6NKQ9	187 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PDZK1P1	A8MUH7	402 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	NPIPB11	E5RHQ5	1161 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	GPRIN2	O60269	458 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SELENOF	O60613	162 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	IPO13	O94829	963 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SUN1	O94901	812 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CDK14	O94921	469 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CBX6	O95503	412 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	MT-CYB	P00156	380 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	IL1A	P01583	271 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	JCHAIN	P01591	159 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CYP1A2	P05177	515 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	KRT7	P08729	469 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CD48	P09326	243 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	G6PD	P11413	515 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ZNF7	P17097	686 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	DNASE1	P24855	282 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PTPN4	P29074	926 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	LEPR	P48357	1165 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ANXA11	P50995	505 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ZNF75D	P51815	510 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ARSF	P54793	590 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	MLLT10	P55197	1068 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	TAS2R40	P59535	323 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	RPS15	P62841	145 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	TXNL4A	P83876	142 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PDE1B	Q01064	536 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PPID	Q08752	370 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	TSTA3	Q13630	321 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	GPR18	Q14330	331 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	IQCC	Q4KMZ1	466 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ZMAT1	Q5H9K5	638 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ZDHHC20	Q5W0Z9	365 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PAPD7	Q5XG87	772 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	METAP1D	Q6UB28	335 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	TDRP	Q86YL5	185 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CARF	Q8N187	725 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	ATG4A	Q8WYN0	398 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	RAPGEF5	Q92565	580 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	NXNL1	Q96CM4	212 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CXorf40B	Q96DE9	158 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	RNF31	Q96EP0	1072 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SLC41A2	Q96JW4	573 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	FYTTD1	Q96QD9	318 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	VPS35	Q96QK1	796 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	DCLRE1C	Q96SD1	692 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	OSBPL9	Q96SU4	736 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	DDX47	Q9H0S4	455 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	THAP2	Q9H0W7	228 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	TRABD	Q9H4I3	376 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SAP30L	Q9HAJ7	183 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	MLXIPL	Q9NP71	852 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	FARSB	Q9NSD9	589 aa	Known RBP	5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PNPLA3	Q9NST1	481 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	OR6C3	Q9NZP0	311 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	KLHL14	Q9P2G3	628 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CTNNAL1	Q9UBT7	734 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	RARRES3	Q9UL19	164 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	PKP3	Q9Y446	797 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SLC30A1	Q9Y6M5	507 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	LRP4	O75096	1905 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	SCN8A	Q9UQD0	1980 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	DOPEY1	Q5JWR5	2465 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CENPE	Q02224	2701 aa		5.36	□□□□□ -1.55
CASC19-233	ENST00000641487	CREBBP	Q92793	2442 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	TMEM247	A6NEH6	219 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	OR52A4P	A6NMU1	304 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	ZNF487	B1APH4	448 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487		K7EM74	188 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	IFNL4	K9M1U5	179 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	KIF2A	O00139	706 aa	Predicted RBP	5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	KCNK1	O00180	336 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	RSL1D1	O76021	490 aa	Known RBP	5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	SORBS2	O94875	1100 aa	Known RBP	5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	PROSC	O94903	275 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	MBD3	O95983	291 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	HLA-DQA2	P01906	255 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	ALDOC	P09972	364 aa	Known RBP	5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	SBK2	P0C263	348 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	CD8B	P10966	210 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	SKIL	P12757	684 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	CREB1	P16220	341 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	ACADL	P28330	430 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	DUSP1	P28562	367 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	TIA1	P31483	386 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	HMGCL	P35914	325 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	RRAD	P55042	308 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	MTTP	P55157	894 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	RAC3	P60763	192 aa		5.35	□□□□□ -1.55
CASC19-233	ENST00000641487	GALK2	Q01415	458 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms