RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 PARD6BQ9BYG5 372 aa16.27■□□□□ 0.2
PTPN11-207ENST00000639857 NXF5Q9H1B4 397 aaKnown RBP16.27■□□□□ 0.2
PTPN11-207ENST00000639857 DEFB127Q9H1M4 99 aa16.27■□□□□ 0.2
PTPN11-207ENST00000639857 PROK2Q9HC23 129 aa16.27■□□□□ 0.2
PTPN11-207ENST00000639857 C1orf109Q9NX04 203 aa16.27■□□□□ 0.2
PTPN11-207ENST00000639857 DTX4Q9Y2E6 619 aa16.27■□□□□ 0.2
PTPN11-207ENST00000639857 LRRC3CA6NJW4 275 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 ADAM10O14672 748 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 TRIM3O75382 744 aaPredicted RBP16.26■□□□□ 0.19
PTPN11-207ENST00000639857 PPM1BO75688 479 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 PCSK2P16519 638 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 EMDP50402 254 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 FBXW4P57775 412 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 DUSP8Q13202 625 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 EXOSC7Q15024 291 aaKnown RBP16.26■□□□□ 0.19
PTPN11-207ENST00000639857 KIAA0040Q15053 153 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 LTB4RQ15722 352 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
PTPN11-207ENST00000639857 HIST2H2BCQ6DN03 193 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 TMEM211Q6ICI0 200 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 NOXRED1Q6NXP6 359 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 CCDC116Q8IYX3 515 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 OR9A2Q8NGT5 310 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 FCRL1Q96LA6 429 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 BTBD9Q96Q07 612 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 CCT7Q99832 543 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 ANGPTL4Q9BY76 406 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 ACKR4Q9NPB9 350 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 CHST11Q9NPF2 352 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 SLC17A7Q9P2U7 560 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN11-207ENST00000639857 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 V9GYY5 206 aaPredicted RBP16.26■□□□□ 0.19
PTPN11-207ENST00000639857 ARHGAP21Q5T5U3 1957 aa16.26■□□□□ 0.19
PTPN11-207ENST00000639857 A0A087WV62 115 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 FIGNL2A6NMB9 653 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 MYO1GB0I1T2 1018 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 PRSS44E7EML9 344 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 PDE9AO76083 593 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 MRPS35P82673 323 aaKnown RBP16.25■□□□□ 0.19
PTPN11-207ENST00000639857 C2orf80Q0P641 193 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 SNTA1Q13424 505 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 ZNF630Q2M218 657 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-207ENST00000639857 TMEM198Q66K66 360 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 FAM180BQ6P0A1 224 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 NUP54Q7Z3B4 507 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 CROCCP2Q86T23 111 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 PACS2Q86VP3 889 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 OR5M3Q8NGP4 307 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 SARAFQ96BY9 339 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 NTNG2Q96CW9 530 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 TMEM41AQ96HV5 264 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 BBS4Q96RK4 519 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 LRTM1Q9HBL6 345 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 SSU72Q9NP77 194 aaKnown RBP16.25■□□□□ 0.19
PTPN11-207ENST00000639857 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-207ENST00000639857 POLR3HQ9Y535 204 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-207ENST00000639857 PCDHGB3Q9Y5G1 929 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 DNAJC15Q9Y5T4 150 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 CRYBG3Q68DQ2 2970 aa16.25■□□□□ 0.19
PTPN11-207ENST00000639857 TRGV5A0A0B4J1U4 118 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ATP6AP2A0A1C7CYW4 349 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 HNRNPRO43390 633 aaKnown RBP16.24■□□□□ 0.19
PTPN11-207ENST00000639857 TYROBPO43914 113 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ABCB7O75027 752 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 COQ9O75208 318 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 SPAG7O75391 227 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 SEC22BO75396 215 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ATP6AP2O75787 350 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ABCB1P08183 1280 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ELAVL4P26378 380 aaKnown RBP16.24■□□□□ 0.19
PTPN11-207ENST00000639857 COL8A1P27658 744 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 NTSP30990 170 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 CASP3P42574 277 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 MAN2A2P49641 1150 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 PLCXD2Q0VAA5 305 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 KRT71Q3SY84 523 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-207ENST00000639857 TMEM64Q6YI46 380 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 CLYBLQ8N0X4 340 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 OMA1Q96E52 524 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 RILPQ96NA2 401 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 LDAHQ9H6V9 325 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 TAS2R9Q9NYW1 312 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 COQ3Q9NZJ6 369 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 LIPGQ9Y5X9 500 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 CACNA1DQ01668 2161 aa16.24■□□□□ 0.19
PTPN11-207ENST00000639857 OR6C70A6NIJ9 312 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 PLOD2O00469 737 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 TBX19O60806 448 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 CLDN14O95500 239 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 ETV4P43268 484 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 EMC4Q5J8M3 183 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 ZNF787Q6DD87 383 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 SLC30A6Q6NXT4 461 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 Q6ZSR9 355 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 CDC26Q8NHZ8 85 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms