RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TLR4O00206 839 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HS3ST1O14792 307 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SIAH2O43255 324 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ORC5O43913 435 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TSPAN12O95859 305 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 LALBAP00709 142 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ALPIP09923 528 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 AREGP15514 252 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 MYL9P24844 172 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 STK19P49842 368 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SNU13P55769 128 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ERVFRD-1P60508 538 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 E2F1Q01094 437 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TCP10Q12799 353 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ILKQ13418 452 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PMS2P11Q13670 270 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PTPRCAPQ14761 206 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KIAA0930Q6ICG6 404 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HS3ST5Q8IZT8 346 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 UBAC2Q8NBM4 344 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KIAA0895Q8NCT3 520 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 C1GALT1C1Q96EU7 318 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLC38A1Q9H2H9 487 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PSG11Q9UQ72 335 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 C2orf16Q68DN1 1984 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 MAST1Q9Y2H9 1570 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PRAG1Q86YV5 1406 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 A0A1B0GUH1 482 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KDM4FA0A1W2PPD8 638 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CXCR6O00574 342 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TP53I11O14683 189 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 UGT2B11O75310 529 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 EPHX1P07099 455 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR10J4P0C629 311 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SCGB1A1P11684 91 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 DPP4P27487 766 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CSNK1EP49674 416 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 GZMKP49863 264 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 DAOAP59103 153 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FGFBP1Q14512 234 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 C17orf78Q8N4C9 275 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ZCCHC9Q8N567 271 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FAM86B1Q8N7N1 296 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 LPAR1Q92633 364 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KCNJ9Q92806 393 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TPT1P8Q9HAU6 139 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ZDHHC3Q9NYG2 299 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 GABRQQ9UN88 632 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR51B4Q9Y5P0 310 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CYB5BO43169 146 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ADORA3P0DMS8 318 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PTPN3P26045 913 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 IL13RA1P78552 427 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HLFQ16534 295 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF699Q32M78 642 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CST9LP1Q5W188 147 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ABHD13Q7L211 337 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KANSL1Q7Z3B3 1105 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 MOCOSQ96EN8 888 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLC41A3Q96GZ6 507 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HSFY1Q96LI6 401 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLC6A7Q99884 636 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 THAP7Q9BT49 309 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLC52A2Q9HAB3 445 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF160Q9HCG1 818 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 MED9Q9NWA0 146 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR52A1Q9UKL2 312 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HEATR5BQ9P2D3 2071 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF609O15014 1411 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 H0YGN5 161 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PIP5K1BO14986 540 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SEC14L2O76054 403 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HOXC4P09017 264 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ITGAMP11215 1152 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ARR3P36575 388 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 GCGRP47871 477 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 KLF3P57682 345 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FOXM1Q08050 763 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 GCNT6Q5T4J0 391 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 HIST2H3PS2Q5TEC6 136 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FBXL19Q6PCT2 694 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SMARCD3Q6STE5 483 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 DLK2Q6UY11 383 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM144Q7Z5S9 345 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR5L1Q8NGL2 311 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 BCO2Q9BYV7 579 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PPIL3Q9H2H8 161 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FAM83DQ9H4H8 585 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PDZD7Q9H5P4 517 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SCUBE2Q9NQ36 999 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TFCP2L1Q9NZI6 479 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ANGEL1Q9UNK9 670 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 BOLA1Q9Y3E2 137 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms