RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MTUS2Q5JR59 1369 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PTPRCP08575 1304 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 A0A087X0K7 114 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 A0A0J9YVX5 310 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 A0A1B0GVL5 298 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 A0A1W2PQL4 384 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 TMEM213A2RRL7 107 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SMCO3A2RU48 225 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM90A10PA6NDY2 464 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 DUXAA6NLW8 204 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ATP6V1G2-DDX39BF2Z307 99 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 POC1B-GALNT4F8VUJ3 575 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 M0QZQ0 153 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 EEF2KO00418 725 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 FBP2O00757 339 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PTGESO14684 152 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 RAB29O14966 203 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 DSCR3O14972 297 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC22A2O15244 555 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NBR2O15453 112 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NKX2-8O15522 239 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 RS1O15537 224 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 B4GALT5O43286 388 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 RGS10O43665 173 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SSX4O60224 188 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 OR10H2O60403 315 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CTNSO60931 367 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CCNKO75909 580 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 B3GAT3O94766 335 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SCELO95171 688 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PLEKHA8P1O95397 391 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TSPAN12O95859 305 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SYF2O95926 243 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 ALDOAP04075 364 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 RPN2P04844 631 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 HEXAP06865 529 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 GUSBP08236 651 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ANKRD34CP0C6C1 535 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CBSLP0DN79 551 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NR2F6P10588 404 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 HGFP14210 728 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 IL2RBP14784 551 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ETS2P15036 469 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CPN1P15169 458 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NCK1P16333 377 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CD22P20273 847 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 EDN2P20800 178 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 DRD1P21728 446 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PTGS1P23219 599 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ME2P23368 584 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 WARSP23381 471 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 ACADLP28330 430 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NDUFS1P28331 727 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 HIBADHP31937 336 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 STX2P32856 288 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CDH5P33151 784 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 CBSP35520 551 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 STAT6P42226 847 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MAGEA6P43360 314 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NPY2RP49146 381 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PKNOX1P55347 436 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TAS2R60P59551 318 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 AP1S1P61966 158 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 PPIAP62937 165 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC25A3Q00325 362 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SORDQ00796 357 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MYBPC1Q00872 1141 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FLI1Q01543 452 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 BST2Q10589 180 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 ILF3Q12906 894 aaKnown RBP eCLIP2.8□□□□□ -1.96
VIM-210ENST00000637053 HSPB3Q12988 150 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 AQP6Q13520 282 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 IL13RA2Q14627 380 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TRAM2Q15035 370 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 P2RY14Q15391 338 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 NPTX1Q15818 432 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 WHAMMP3Q1A5X7 153 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ZIK1Q3SY52 487 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM174BQ3ZCQ3 159 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ZNF568Q3ZCX4 644 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 GXYLT1Q4G148 440 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 AASDHQ4L235 1098 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 MTX3Q5HYI7 312 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 TMEM63BQ5T3F8 832 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 LRIF1Q5T3J3 769 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 DDI2Q5TDH0 399 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ARMCX5Q6P1M9 558 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC39A4Q6P5W5 647 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 VWA1Q6PCB0 445 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 KCNIP4Q6PIL6 250 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 FAM198BQ6UWH4 519 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 C5orf46Q6UWT4 87 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 CD300LGQ6UXG3 332 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 DPPA4Q7L190 304 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 SLC16A9Q7RTY1 509 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MRPL21Q7Z2W9 205 aaKnown RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 DPPA2Q7Z7J5 298 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 ITIH5Q86UX2 942 aa2.8□□□□□ -1.96
VIM-210ENST00000637053 MYPOPQ86VE0 399 aaPredicted RBP2.8□□□□□ -1.96
VIM-210ENST00000637053 ERICH1Q86X53 443 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms