RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 KLBQ86Z14 1044 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 PLXDC1Q8IUK5 500 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 NR4A3Q92570 626 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 ZNF160Q9HCG1 818 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 ZIM2Q9NZV7 527 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 CEBPZOSA8MTT3 80 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 ITGB5P18084 799 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 APOFQ13790 326 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 HEPHL1Q6MZM0 1159 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 FITM2Q8N6M3 262 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 SCRN2Q96FV2 425 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 ZDHHC2Q9UIJ5 367 aa16.74■□□□□ 0.27
CACNA1A-225ENST00000636389 CCDC28AQ8IWP9 274 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ALG3Q92685 438 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 BIN3Q9NQY0 253 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 DECR2Q9NUI1 292 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 GALPQ9UBC7 116 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AMY2AP04746 511 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CLCN2P51788 898 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ACTC1P68032 377 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ACTA1P68133 377 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AGTRAPQ6RW13 159 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ZNF439Q8NDP4 499 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 OR9A2Q8NGT5 310 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 MGAT4BQ9UQ53 548 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 MAP2K7O14733 419 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ITM2AO43736 263 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SC5DO75845 299 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CREB1P16220 341 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 GRIN2CQ14957 1233 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ZNF761Q86XN6 746 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SKA3Q8IX90 412 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SUCNR1Q9BXA5 334 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CD244Q9BZW8 370 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 RARRES3Q9UL19 164 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AGPAT2O15120 278 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 GALNT1Q10472 559 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 FGL2Q14314 439 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 IL17AQ16552 155 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AGAP7PQ5VUJ5 663 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AGAP6Q5VW22 663 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 PLCXD3Q63HM9 321 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SLC27A4Q6P1M0 643 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 LRRC25Q8N386 305 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CSNK1A1LQ8N752 337 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 AGAP4Q96P64 663 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 VRK1Q99986 396 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SCGB1D1O95968 90 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ACVRL1P37023 503 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 DEFB134Q4QY38 66 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 TPRG1Q6ZUI0 275 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ZFP82Q8N141 532 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 RBMXL3Q8N7X1 1067 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 KCNA7Q96RP8 456 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 SLIT1O75093 1534 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 ANGPTL7O43827 346 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 TUSC2O75896 110 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CLDN19Q8N6F1 224 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 CDKN2AIPNLQ96HQ2 116 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 RHBDD3Q9Y3P4 386 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 HCN4Q9Y3Q4 1203 aa16.73■□□□□ 0.27
CACNA1A-225ENST00000636389 C12orf71A8MTZ7 269 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 RPL35P42766 123 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 ART1P52961 327 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 ACSBG2Q5FVE4 666 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 FBXW5Q969U6 566 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 DNAJC19Q96DA6 116 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 SENP5Q96HI0 755 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 HS6ST2Q96MM7 605 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 ANXA7P20073 488 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 DDCP20711 480 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 ASRGL1Q7L266 308 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 KIAA0907Q7Z7F0 614 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 SGPP2Q8IWX5 399 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 CD93Q9NPY3 652 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 APOBEC3BQ9UH17 382 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 AP1G1O43747 822 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 PTAFRP25105 342 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 ELK4P28324 431 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 SQSTM1Q13501 440 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 FCRLBQ6BAA4 426 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 GTPBP8Q8N3Z3 284 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 FAM160A2Q8N612 972 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 FAM71F1Q96KD3 344 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 TMEM14AQ9Y6G1 99 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 CKMT2P17540 419 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 PPP5CP53041 499 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 GINS1Q14691 196 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 SF3B4Q15427 424 aaKnown RBP eCLIP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 C9orf152Q5JTZ5 239 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 EBF4Q9BQW3 602 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 SLC2A8Q9NY64 477 aa16.72■□□□□ 0.27
CACNA1A-225ENST00000636389 OIP5O43482 229 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms