RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TMEM150CB9EJG8 249 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 UPK1AO00322 258 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 HMGN4O00479 90 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CHST10O43529 356 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 LDB3O75112 727 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 NME6O75414 186 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 OR2B3O76000 313 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CPNE6O95741 557 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 RAP2AP10114 183 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ARAFP10398 606 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 HOXB6P17509 224 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 NELFEP18615 380 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 KDELR2P33947 212 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 AVPR1BP47901 424 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PCBP3P57721 371 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PRR5P85299 388 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 FOLH1Q04609 750 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SYT16Q17RD7 645 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF630Q2M218 657 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 FAM214AQ32MH5 1076 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 GRAMD1BQ3KR37 738 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 WLSQ5T9L3 541 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 INTS11Q5TA45 600 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PRAMEF17Q5VTA0 474 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CEACAM20Q6UY09 585 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 B3GNT8Q7Z7M8 397 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CATSPER1Q8NEC5 780 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 OR56A1Q8NGH5 318 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 OR1L3Q8NH93 324 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ADAMTS18Q8TE60 1221 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TANKQ92844 425 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ANKRD9Q96BM1 317 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ELP4Q96EB1 424 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 GIMAP5Q96F15 307 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CHID1Q9BWS9 393 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 KLHL4Q9C0H6 718 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ADNPQ9H2P0 1102 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF768Q9H5H4 540 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CLK4Q9HAZ1 481 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 NTN4Q9HB63 628 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 C3orf14Q9HBI5 128 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PISDQ9UG56 409 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ATMQ13315 3056 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MYOCOSA0A1B0GUC4 107 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 PMS2P1A4D2B8 440 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 SUV39H1O43463 412 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 PRSS23O95084 383 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 FHP07954 510 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 RNH1P13489 461 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF26P17031 533 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 AQP1P29972 269 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 PPP2R1BP30154 601 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MC3RP41968 323 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 ANXA11P50995 505 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 PRKAG1P54619 331 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MAT1AQ00266 395 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 CDK6Q00534 326 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 ID2Q02363 134 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 FUT5Q11128 374 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 SCARB2Q14108 478 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 IQCCQ4KMZ1 466 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 TNFAIP8L2Q6P589 184 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 FAM111BQ6SJ93 734 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 IZUMO2Q6UXV1 221 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC30A8Q8IWU4 369 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 GPR135Q8IZ08 494 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 OR7G2Q8NG99 324 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 NFKBIDQ8NI38 313 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 RAB8BQ92930 207 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC47A1Q96FL8 570 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MAGED4Q96JG8 741 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC35G5Q96KT7 338 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF184Q99676 751 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 DPYSL5Q9BPU6 564 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MAGIXQ9H6Y5 334 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 FANCEQ9HB96 536 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 THUMPD1Q9NXG2 353 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 NTMQ9P121 344 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 HCN3Q9P1Z3 774 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 RPS6KA6Q9UK32 745 aa8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 MRPS33Q9Y291 106 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-223ENST00000627587 BLACEA4D250 179 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM247A6NEH6 219 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 H0YIG0 161 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ACOX3O15254 700 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EMC8O43402 210 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PEX1O43933 1283 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF682O95780 498 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 GPR75O95800 540 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 RECKO95980 971 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 HMGN2P05204 90 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TFPTP0C1Z6 253 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms