RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 IFITM3Q01628 133 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 SPCS2Q15005 226 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 SYPL1Q16563 259 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 REEP3Q6NUK4 255 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 SHQ1Q6PI26 577 aaKnown RBP17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 ABHD13Q7L211 337 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 C19orf47Q8N9M1 422 aaKnown RBP17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 SIMC1Q8NDZ2 872 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 C16orf58Q96GQ5 468 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 TXNDC15Q96J42 360 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 MBOAT4Q96T53 435 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 AMBRA1Q9C0C7 1298 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 PADI2Q9Y2J8 665 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 NAALAD2Q9Y3Q0 740 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 SLC22A7Q9Y694 548 aa17.35■□□□□ 0.37
PCDHB2-202ENST00000622947 A0A1B0GVT2 93 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 URADA6NGE7 173 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 PROS1P07225 676 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 PIGAP37287 484 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 MC3RP41968 323 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 GFERP55789 205 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 ITGA1P56199 1179 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 SRSF5Q13243 272 aaKnown RBP17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 DNASE1L3Q13609 305 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 CYP4Z1Q86W10 505 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 SPPL2AQ8TCT8 520 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 KAT2AQ92830 837 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 SLC38A3Q99624 504 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 TOR3AQ9H497 397 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 RUBCNLQ9H714 662 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 UCK1Q9HA47 277 aa17.34■□□□□ 0.37
PCDHB2-202ENST00000622947 CASC3O15234 703 aaKnown RBP17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 HMGN2P05204 90 aaKnown RBP17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 AFF3P51826 1226 aaKnown RBP17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 FUT5Q11128 374 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 NKAIN2Q5VXU1 208 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 TMEM64Q6YI46 380 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 SLC25A45Q8N413 288 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 Q8N9G6 341 aaPredicted RBP17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 SDCCAG3Q96C92 435 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 ELP4Q96EB1 424 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 SLC35G5Q96KT7 338 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 PRELID1Q9Y255 219 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 ANGPT4Q9Y264 503 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 KCNE3Q9Y6H6 103 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 WDR87Q6ZQQ6 2873 aa17.33■□□□□ 0.37
PCDHB2-202ENST00000622947 LILRA5A6NI73 299 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 FAM227AF5H4B4 570 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 GALR3O60755 368 aaPredicted RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 GIMD1P0DJR0 217 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 MPIP34949 423 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 POLR2IP36954 125 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 BUD31P41223 144 aaPredicted RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 YAP1P46937 504 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 FNTBP49356 437 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 BNC1Q01954 994 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 ID2Q02363 134 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 LASP1Q14847 261 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 SLX4IPQ5VYV7 408 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 GTF2IRD2BQ6EKJ0 949 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 GTF2IRD2Q86UP8 949 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 XAGE5Q8WWM1 108 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 VMP1Q96GC9 406 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 RDH12Q96NR8 316 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 RBM4BQ9BQ04 359 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 RBM4Q9BWF3 364 aaKnown RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 ROGDIQ9GZN7 287 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 IFT80Q9P2H3 777 aaPredicted RBP17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 PHF11Q9UIL8 331 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 RP1P56715 2156 aa17.33■□□□□ 0.36
PCDHB2-202ENST00000622947 UNC13CQ8NB66 2214 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 J3KTA2 159 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SGK494L7N484 410 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 CYR61O00622 381 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MITFO75030 526 aaPredicted RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 DAPP51397 102 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 XKP51811 444 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 CDC20Q12834 499 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 ELOAQ14241 798 aaKnown RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 PUM1Q14671 1186 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MANEAQ5SRI9 462 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 SIGIRRQ6IA17 410 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MCATQ8IVS2 390 aaKnown RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 DNAJC22Q8N4W6 341 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 BPIFB6Q8NFQ5 453 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 GPR32P1Q8NGA4 272 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MED30Q96HR3 178 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 WFDC6Q9BQY6 131 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MARCH7Q9H992 704 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 ZNF780BQ9Y6R6 833 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 HS6ST1O60243 411 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 LDB3O75112 727 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MFN2O95140 757 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 MYF5P13349 255 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 C14orf28Q4W4Y0 310 aa17.32■□□□□ 0.36
PCDHB2-202ENST00000622947 IFI44LQ53G44 452 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms