RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 AMBNQ9NP70 447 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 ZFP57Q9NU63 452 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 TAS2R16Q9NYV7 291 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 KLHL42Q9P2K6 505 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 GREB1Q4ZG55 1949 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 ALPK3Q96L96 1907 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 VWA8A3KMH1 1905 aa7.11□□□□□ -1.27
TRIM49B-202ENST00000622138 PLSCR5A0PG75 271 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 RHPN2P1A8MT19 583 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 A8MVJ9 347 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 TEX46H3BTG2 121 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PRAMEF2O60811 474 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 RGS11O94810 467 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ESR1P03372 595 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 G6PDP11413 515 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 TYMPP19971 482 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HLA-DPA1P20036 260 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 RAB4AP20338 218 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HOXD9P28356 352 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 THPOP40225 353 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC1A3P43003 542 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 BDKRB1P46663 353 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 XKP51811 444 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SMSP52788 366 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 STARD6P59095 220 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 KIAA1024LP59773 190 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 DCDP81605 110 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MXD1Q05195 221 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 C1DQ13901 141 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF235Q14590 738 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 UBXN2BQ14CS0 331 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CTSL3PQ5NE16 218 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF648Q5T619 568 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SPRYD7Q5W111 196 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PSAPL1Q6NUJ1 521 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MON1AQ86VX9 555 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 OXR1Q8N573 874 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 OR4K2Q8NGD2 314 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 OR14A16Q8NHC5 309 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 STAG3L4Q8TBR4 150 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PHOSPHO1Q8TCT1 267 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NETO1Q8TDF5 533 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 RFT1Q96AA3 541 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ORAI1Q96D31 301 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FAM120BQ96EK7 910 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF599Q96NL3 588 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 KCNC2Q96PR1 638 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NLNQ9BYT8 704 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ACTR6Q9GZN1 396 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CDCP1Q9H5V8 836 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NUDT15Q9NV35 164 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MS4A12Q9NXJ0 267 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GDE1Q9NZC3 331 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PPP4R1LQ9P1A2 415 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 METTL1Q9UBP6 276 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 AFF4Q9UHB7 1163 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PCDHB8Q9UN66 801 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CLCA2Q9UQC9 943 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NOD1Q9Y239 953 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CHD5Q8TDI0 1954 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 TRBV5-3A0A0A0MS03 114 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 DRGXA6NNA5 263 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 DISC1C4P0D8 188 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 WNT9AO14904 365 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PER2O15055 1255 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GPR182O15218 404 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 KLK8O60259 260 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PRAF2O60831 178 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SC5DO75845 299 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SERPINA3P01011 423 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 IGHA2P01877 340 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 RB1P06400 928 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HEXBP07686 556 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 HOXC4P09017 264 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GAAP10253 952 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 DRD2P14416 443 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GABRA1P14867 456 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 MUC1P15941 1255 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF8P17098 575 aaPredicted RBP7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CXCL2P19875 107 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 OR1E1P30953 314 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 S100A11P31949 105 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 CTNNB1P35222 781 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SOX3P41225 446 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 PCP4P48539 62 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 GZMMP51124 257 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ERVPABLB-1P60509 514 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 ABHD18Q0P651 414 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 LRRC32Q14392 662 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 KIAA0040Q15053 153 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 SPHARQ15513 63 aa7.1□□□□□ -1.27
TRIM49B-202ENST00000622138 NTRK2Q16620 822 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms