RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	CRB2	Q5IJ48	1285 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	GPR139	Q6DWJ6	353 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	MTFR2	Q6P444	385 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C22orf39	Q6P5X5	142 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	DDX53	Q86TM3	631 aa	Known RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	NEIL3	Q8TAT5	605 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C16orf78	Q8WTQ4	265 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	MARVELD3	Q96A59	401 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	LINC00052	Q96N35	136 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	FOLH1B	Q9HBA9	442 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	FZD3	Q9NPG1	666 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	SEMA3G	Q9NS98	782 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	NKIRAS2	Q9NYR9	191 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	CLCA2	Q9UQC9	943 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	PRR23A	A6NEV1	266 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	HNRNPCL2	B2RXH8	293 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	DHFR	P00374	187 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	UROD	P06132	367 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ANXA3	P12429	323 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	BICRAL	Q6AI39	1079 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	KANSL1	Q7Z3B3	1105 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLC9A6	Q92581	669 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	RBPMS	Q93062	196 aa	Known RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	CREB3L1	Q96BA8	519 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C19orf43	Q9BQ61	176 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ENAM	Q9NRM1	1142 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ATP6V1H	Q9UI12	483 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	LALBA	P00709	142 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ADA	P00813	363 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	IFNA7	P01567	189 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	HOXD4	P09016	255 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	FURIN	P09958	794 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	LIMS1	P48059	325 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	HMGA2	P52926	109 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	MANF	P55145	182 aa	Known RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C21orf58	P58505	322 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ACSM5	Q6NUN0	579 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	CAMKMT	Q7Z624	323 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	ST8SIA4	Q92187	359 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	MRPS31	Q92665	395 aa	Known RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	OTULIN	Q96BN8	352 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	C11orf24	Q96F05	449 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	WFDC6	Q9BQY6	131 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	CHIA	Q9BZP6	476 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	STARD7	Q9NQZ5	370 aa		13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	MRPS7	Q9Y2R9	242 aa	Known RBP	13.6	□□□□□ -0.23
SYNRG-231	ENST00000622045	POM121C	A8CG34	1229 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045		A8MVJ9	347 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	QSOX1	O00391	747 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	H1F0	P07305	194 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	IL3	P08700	152 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	DNASE1	P24855	282 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	PDHA2	P29803	388 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RPL3	P39023	403 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	CTSC	P53634	463 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ATP12A	P54707	1039 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	COX10	Q12887	443 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ADAM15	Q13444	863 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	NTRK2	Q16620	822 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SYT14P1	Q58G82	188 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SDR16C5	Q8N3Y7	309 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	BMPER	Q8N8U9	685 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	MYLIP	Q8WY64	445 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RBP7	Q96R05	134 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLAMF7	Q9NQ25	335 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLCO1C1	Q9NYB5	712 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ARAF	P10398	606 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	GABRR2	P28476	465 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	GPR68	Q15743	365 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	QSOX2	Q6ZRP7	698 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	HSD11B1L	Q7Z5J1	315 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	MMP21	Q8N119	569 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	CXorf40B	Q96DE9	158 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RNFT2	Q96EX2	444 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	OTUB1	Q96FW1	271 aa	Predicted RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SYT17	Q9BSW7	474 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SORBS1	Q9BX66	1292 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	PPA2	Q9H2U2	334 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	OR51J1	Q9H342	316 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RC3H2	Q9HBD1	1191 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLC25A13	Q9UJS0	675 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ATG13	O75143	517 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	NME6	O75414	186 aa	Predicted RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLCO2B1	O94956	709 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RECK	O95980	971 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	HLA-DQB1	P01920	261 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	WDR5	P61964	334 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	PIN1	Q13526	163 aa	Predicted RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ELOA	Q14241	798 aa	Known RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	ZNF791	Q3KP31	576 aa	Predicted RBP	13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	RAET1G	Q6H3X3	334 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	TMEM220	Q6QAJ8	160 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLCO4C1	Q6ZQN7	724 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	OLIG3	Q7RTU3	272 aa		13.59	□□□□□ -0.23
SYNRG-231	ENST00000622045	SORCS2	Q96PQ0	1159 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms