RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ETS2P15036 469 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SOX18P35713 384 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 YAP1P46937 504 aaKnown RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 HPCAP84074 193 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SPIBQ01892 262 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 KCNC4Q03721 635 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 LAPTM4AQ15012 233 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SLC36A3Q495N2 470 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PRAMEF8Q5VWM4 474 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PRAMEF7Q5VXH5 474 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SLC16A11Q8NCK7 471 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 GPR32P1Q8NGA4 272 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 CDS1Q92903 461 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 NRBF2Q96F24 287 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 NDC1Q9BTX1 674 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 BTBD2Q9BX70 525 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 AMBRA1Q9C0C7 1298 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 GABARAPL1Q9H0R8 117 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 TMEM184BQ9Y519 407 aaPredicted RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 PCDHGB5Q9Y5G0 923 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PCDHGB3Q9Y5G1 929 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ORC6Q9Y5N6 252 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ADAMTS20P59510 1910 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 TOX3O15405 576 aaPredicted RBP20.06■□□□□ 0.8
SPAST-204ENST00000621856 ZNF749O43361 778 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 CPNE6O95741 557 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 IFI6P09912 130 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 CT62P0C5K7 136 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 XCR1P46094 333 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 KCNJ5P48544 419 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 DAB2P98082 770 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 MGAT2Q10469 447 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 SQSTM1Q13501 440 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 EXOSC7Q15024 291 aaKnown RBP20.06■□□□□ 0.8
SPAST-204ENST00000621856 ANGPT1Q15389 498 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 ANKRD34AQ69YU3 496 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 ZNF354BQ96LW1 612 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 RDH12Q96NR8 316 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 TRNT1Q96Q11 434 aaKnown RBP20.06■□□□□ 0.8
SPAST-204ENST00000621856 EPYCQ99645 322 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 BARD1Q99728 777 aaKnown RBP20.06■□□□□ 0.8
SPAST-204ENST00000621856 ALOXE3Q9BYJ1 711 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 LRRN3Q9H3W5 708 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 FGF21Q9NSA1 209 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 PDP1Q9P0J1 537 aaPredicted RBP20.06■□□□□ 0.8
SPAST-204ENST00000621856 ENPP4Q9Y6X5 453 aa20.06■□□□□ 0.8
SPAST-204ENST00000621856 TNFRSF11BO00300 401 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 ACP2P11117 423 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 BTG2P78543 158 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 TMPRSS9Q7Z410 1059 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 ST13P4Q8IZP2 240 aaPredicted RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 VWA5B2Q8N398 1253 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 MVB12AQ96EY5 273 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 DGAT2Q96PD7 388 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 SOX17Q9H6I2 414 aaPredicted RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 ENAMQ9NRM1 1142 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 DHCR7Q9UBM7 475 aaKnown RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 CDC14AQ9UNH5 594 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 LAMA1P25391 3075 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 VCANP13611 3396 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 USP34Q70CQ2 3546 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 A0A1W2PQM1 296 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 TGFBR3LH3BV60 316 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 DNAJB5O75953 348 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 ALOX5P09917 674 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 MSL3P1P0C860 447 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 AVPR2P30518 371 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 OR1D4P47884 311 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 EPS8Q12929 822 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 DUSP5Q16690 384 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 ISLR2Q6UXK2 745 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 ZNF574Q6ZN55 896 aaPredicted RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 DGAT2L6Q6ZPD8 337 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 PRR23CQ6ZRP0 262 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 HMGN2P46Q86SG4 172 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 GALNT12Q8IXK2 581 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 VANGL1Q8TAA9 524 aaPredicted RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 IFI44Q8TCB0 444 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 RBM18Q96H35 190 aaKnown RBP20.05■□□□□ 0.8
SPAST-204ENST00000621856 FBXL20Q96IG2 436 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 PIP5K1AQ99755 562 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 TOR3AQ9H497 397 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 BATF3Q9NR55 127 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 KIF17Q9P2E2 1029 aa20.05■□□□□ 0.8
SPAST-204ENST00000621856 H0YAE9 185 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 J3KTA2 159 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 RECKO95980 971 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 ALPPP05187 535 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 GNAO1P09471 354 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 MAOAP21397 527 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 MYF6P23409 242 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 RAD23AP54725 363 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 CDH12P55289 794 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 HSD17B7P56937 341 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 IGLV3-21P80748 117 aaPredicted RBP20.04■□□□□ 0.8
SPAST-204ENST00000621856 CHRNEQ04844 493 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 MAP4K2Q12851 820 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 PUM1Q14671 1186 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPAST-204ENST00000621856 PRAMEF17Q5VTA0 474 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 HEPHL1Q6MZM0 1159 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms