RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 METTL2BQ6P1Q9 378 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 PTOV1Q86YD1 416 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 CPOQ8IVL8 374 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 RELL2Q8NC24 303 aaPredicted RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 KCT2Q8NC54 265 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 PIGXQ8TBF5 258 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 SLC25A46Q96AG3 418 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 METTL2AQ96IZ6 378 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 TRAF4Q9BUZ4 470 aaPredicted RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 FBXL2Q9UKC9 423 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 IKZF2Q9UKS7 526 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 FGBP02675 491 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 CKBP12277 381 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 CCR4P51679 360 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 PRKCZQ05513 592 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 SCRN3Q0VDG4 424 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ALG1LQ6GMV1 187 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 RNF180Q86T96 592 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 OR4M1Q8NGD0 313 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ACOT12Q8WYK0 555 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 SEC22CQ9BRL7 303 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYN2-205ENST00000620175 DDX31Q9H8H2 851 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 RDH14Q9HBH5 336 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 LOC105371267A0A1B0GV96 52 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 TCRBV16S1A1N1A0A5B0 115 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 HYKKA2RU49 373 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 GABRPO00591 440 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 PLA2G10O15496 165 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 TSPAN12O95859 305 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 RAF1P04049 648 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 HBQ1P09105 142 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ELK1P19419 428 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 PVALBP20472 110 aaPredicted RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 CCR7P32248 378 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 HMGCLP35914 325 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 SNRPD1P62314 119 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 VEZF1Q14119 521 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 TCTE1Q5JU00 501 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 MMP21Q8N119 569 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 OR7G3Q8NG95 312 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ISG20Q96AZ6 181 aaKnown RBP13.38□□□□□ -0.27
SYN2-205ENST00000620175 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 ENTPD4Q9Y227 616 aa13.38□□□□□ -0.27
SYN2-205ENST00000620175 OR1F1O43749 312 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 ALDH1A1P00352 501 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 C8GP07360 202 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 PRR35P0CG20 571 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 MAGEA11P43364 429 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 TDGQ13569 410 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 AANATQ16613 207 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 CST9Q5W186 159 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 GDPGP1Q6ZNW5 385 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 PDZD9Q8IXQ8 264 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 RADILQ96JH8 1075 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 C7orf34Q96L11 122 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 SDHAF2Q9NX18 166 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 PLEKHA6Q9Y2H5 1048 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 PCDHGA2Q9Y5H1 932 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 SCN9AQ15858 1988 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 TCRBP04435 133 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 GNSP15586 552 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 CXCL3P19876 107 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 F8A1P23610 371 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 NTSP30990 170 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 VEGFCP49767 419 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
SYN2-205ENST00000620175 PSMD4P55036 377 aaKnown RBP13.37□□□□□ -0.27
SYN2-205ENST00000620175 FABP5Q01469 135 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 MLLT11Q13015 90 aaPredicted RBP13.37□□□□□ -0.27
SYN2-205ENST00000620175 SCGB2B2Q4G0G5 96 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 IGSF11Q5DX21 431 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 SLC36A4Q6YBV0 504 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 GPR135Q8IZ08 494 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 ZNF454Q8N9F8 522 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 OR6M1Q8NGM8 313 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 KLK6Q92876 244 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 MTG2Q9H4K7 406 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 SPATA6Q9NWH7 488 aaPredicted RBP13.37□□□□□ -0.27
SYN2-205ENST00000620175 ATAD5Q96QE3 1844 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 LRRN3E7EW58 273 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 FARS2O95363 451 aaKnown RBP13.37□□□□□ -0.27
SYN2-205ENST00000620175 AKR1A1P14550 325 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 LRRC70Q7Z2Q7 622 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 C6orf120Q7Z4R8 191 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 VRK3Q8IV63 474 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 WDR48Q8TAF3 677 aa13.37□□□□□ -0.27
SYN2-205ENST00000620175 SLC35G5Q96KT7 338 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms