RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MRASO14807 208 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PIP5K1BO14986 540 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ANGPT2O15123 496 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PGRMC2O15173 223 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CFLARO15519 480 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PROM1O43490 865 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 DYRK3O43781 588 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 B3GALT2O43825 422 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SLC28A2O43868 658 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ULK1O75385 1050 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PDE5AO76074 875 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 AIFM1O95831 613 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 KRT6AP02538 564 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 KRT6BP04259 564 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TFAP2AP05549 437 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 HEXBP07686 556 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 LINC00032P0C843 101 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 C8orf89P0DMQ9 161 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 UROSP10746 265 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 COX6A1P12074 109 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 RNH1P13489 461 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 HSD3B1P14060 373 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 MAOAP21397 527 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TACR1P25103 407 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PSMA4P25789 261 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 HSD3B2P26439 372 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PEX2P28328 305 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 HMOX2P30519 316 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SOX18P35713 384 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SSR2P43308 183 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 KRT6CP48668 564 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CDK9P50750 372 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 HSD17B7P56937 341 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PSPHP78330 225 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 MS4A2Q01362 244 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CSTF3Q12996 717 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SLAMF1Q13291 335 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CEACAM7Q14002 265 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 KIAA0040Q15053 153 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 AP5B1Q2VPB7 878 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF750Q32MQ0 723 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 AGKQ53H12 422 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 XKR7Q5GH72 579 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 LPCAT4Q643R3 524 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 LCN8Q6JVE9 175 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 KRT80Q6KB66 452 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 H3F3CQ6NXT2 135 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TRIM40Q6P9F5 258 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ISLR2Q6UXK2 745 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 RNF111Q6ZNA4 994 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 DGAT2L6Q6ZPD8 337 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 Q6ZS92 163 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ANKRD37Q7Z713 158 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PTRH1Q86Y79 214 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 OR4N5Q8IXE1 308 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF595Q8IYB9 648 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 DND1Q8IYX4 353 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ARMC10Q8N2F6 343 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ZCCHC7Q8N3Z6 543 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 GLB1L3Q8NCI6 653 aaPredicted RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TSPAN14Q8NG11 270 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 OR11G2Q8NGC1 345 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SUN3Q8TAQ9 357 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 DOK4Q8TEW6 326 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 NUDT8Q8WV74 236 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TWIST2Q8WVJ9 160 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TFAP2CQ92754 450 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TM4SF18Q96CE8 201 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC124Q96CT7 223 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 RCN3Q96D15 328 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 NRBF2Q96F24 287 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CENPNQ96H22 339 aaPredicted RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 METTL2AQ96IZ6 378 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 FCRL1Q96LA6 429 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF354BQ96LW1 612 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SERINC2Q96SA4 455 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 BARD1Q99728 777 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 BCL7BQ9BQE9 202 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 GPATCH1Q9BRR8 931 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 BRF2Q9HAW0 419 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 LYRM4Q9HD34 91 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PALMDQ9NP74 551 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 DDX18Q9NVP1 670 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ZIM2Q9NZV7 527 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 ABI3Q9P2A4 366 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 VPS29Q9UBQ0 182 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 RSL24D1Q9UHA3 163 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 FBXL4Q9UKA2 621 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 FBXW2Q9UKT8 454 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 CES1P1Q9UKY3 287 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 MKL2Q9ULH7 1088 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SNX6Q9UNH7 406 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 PPIEQ9UNP9 301 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TP53TG5Q9Y2B4 290 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 TNRC6AQ8NDV7 1962 aaKnown RBP4.9□□□□□ -1.63
SHMT1-211ENST00000618902 SVILO95425 2214 aa4.9□□□□□ -1.63
SHMT1-211ENST00000618902 IGHV1-45A0A0A0MS14 117 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 TRAV17A0A0B4J275 112 aa4.89□□□□□ -1.63
SHMT1-211ENST00000618902 ATP6AP2A0A1C7CYW4 349 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms