RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 TUBB3Q13509 450 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 NKAPLQ5M9Q1 402 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 C6orf141Q5SZD1 244 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 TMEM185BQ9H7F4 350 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 DMRT3Q9NQL9 472 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 TREX1Q9NSU2 369 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 EIF3KQ9UBQ5 218 aaKnown RBP17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 PTRH2Q9Y3E5 179 aaKnown RBP17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 TEX13CA0A0J9YWL9 993 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 CCRL2O00421 344 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 PLATP00750 562 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 CSNK1DP48730 415 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 PIGFQ07326 219 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 ALG10Q5BKT4 473 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 NRMQ8IXM6 262 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 VWA5B2Q8N398 1253 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 OR4K13Q8NH42 304 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 ZNF480Q8WV37 535 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 HDAC2Q92769 488 aaKnown RBP17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 CIDECQ96AQ7 238 aaPredicted RBP17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 PITX2Q99697 317 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 HOXD1Q9GZZ0 328 aa17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 MYO18AQ92614 2054 aaKnown RBP17.58■□□□□ 0.4
AC008878.3-201ENST00000617428 A0A1W2PPW3 197 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SMAD9O15198 467 aaKnown RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 NUAK1O60285 661 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 TUBA3CQ13748 450 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 MAMDC2Q7Z304 686 aaPredicted RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 OR52E2Q8NGJ4 325 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ZNF675Q8TD23 568 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 TUBA8Q9NY65 449 aaPredicted RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 LHX3Q9UBR4 397 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 RGPD5Q99666 1765 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 J3QRK9 145 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 CHP2O43745 196 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 CPNE6O95741 557 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 F3P13726 295 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 FOLR3P41439 243 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 CCDC120Q96HB5 630 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 BMFQ96LC9 184 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ZNF559Q9BR84 538 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SDR39U1Q9NRG7 319 aaPredicted RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 F11P03951 625 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 FGF4P08620 206 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 PTGER1P34995 402 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SFTPDP35247 375 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 CSNK1EP49674 416 aaKnown RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ACTC1P68032 377 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ACTA1P68133 377 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 CWF19L1Q69YN2 538 aaKnown RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 DCP2Q8IU60 420 aaKnown RBP17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 NEIL3Q8TAT5 605 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 RADILQ96JH8 1075 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SMURF1Q9HCE7 757 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SLC7A11Q9UPY5 501 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 LDB3O75112 727 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 KLKB1P03952 638 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ACVR1BP36896 505 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ZNF33BQ06732 778 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 ECH1Q13011 328 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 COQ5Q5HYK3 327 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 C6orf132Q5T0Z8 1188 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 HACD2Q6Y1H2 254 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 WDR20Q8TBZ3 569 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 RDH14Q9HBH5 336 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 EURLQ9NYK6 297 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 SRPK3Q9UPE1 567 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 PCDHGB6Q9Y5F9 930 aa17.57■□□□□ 0.4
AC008878.3-201ENST00000617428 NUP98P52948 1817 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 H0YAE9 185 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ADH7P40394 386 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 NFATC4Q14934 902 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ARHGAP19Q14CB8 494 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 RGNQ15493 299 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 EEF1A1P5Q5VTE0 462 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 NINJ1Q92982 152 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 NAT6Q93015 286 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 FAM46AQ96IP4 442 aaKnown RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 MS4A4EQ96PG1 132 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ZBP1Q9H171 429 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ADAMTS6Q9UKP5 1117 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 TRAPPC13A5PLN9 417 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 SLC22A31A6NKX4 558 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 H3BML4 177 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 DCKP27707 260 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 HNRNPA0Q13151 305 aaKnown RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 HSD17B12Q53GQ0 312 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 RPS26P11Q5JNZ5 115 aaPredicted RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 C12orf43Q96C57 262 aaKnown RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 CWH43Q9H720 699 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 RPH3AQ9Y2J0 694 aaPredicted RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 MYO10Q9HD67 2058 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 PPP6CO00743 305 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 BCAT2O15382 392 aaPredicted RBP17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 HERV-K104P61576 105 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 TDGQ13569 410 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ARHGAP11AQ6P4F7 1023 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 XKR5Q6UX68 686 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 MSANTD1Q6ZTZ1 278 aa17.56■□□□□ 0.4
AC008878.3-201ENST00000617428 ACBD7Q8N6N7 88 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms