RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ATP1B1P05026 303 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 INHBAP08476 426 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 NAGAP17050 411 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 DEKP35659 375 aaKnown RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 PTGDSP41222 190 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 NAGLUP54802 743 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 MAP4K2Q12851 820 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 SF3B4Q15427 424 aaKnown RBP eCLIP18.95■□□□□ 0.623e-7■■■□□ 15.6
TRAPPC3-208ENST00000616074 TSNAXIP1Q2TAA8 658 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 FAM180BQ6P0A1 224 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 LETMD1Q6P1Q0 360 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 TMEM81Q6P7N7 255 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 YRDCQ86U90 279 aaKnown RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 TGIF2LYQ8IUE0 185 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 CHDHQ8NE62 594 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 ADCY4Q8NFM4 1077 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 GOT1L1Q8NHS2 421 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 MBD3L2Q8NHZ7 208 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 TM4SF18Q96CE8 201 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 OMA1Q96E52 524 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 PAFAH2Q99487 392 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 OSBPL11Q9BXB4 747 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 CDC42EP4Q9H3Q1 356 aaKnown RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 GALNT9Q9HCQ5 603 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZNF639Q9UID6 485 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 CFL2Q9Y281 166 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 SNPHO15079 494 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 CDH16O75309 829 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 GUCY1B2O75343 617 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 CBX7O95931 251 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 TSPAN8P19075 237 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 PLCXD2Q0VAA5 305 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 NUP54Q7Z3B4 507 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 RELL1Q8IUW5 271 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZNF483Q8TF39 744 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 SELENOMQ8WWX9 145 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 KLHL29Q96CT2 875 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 LCORQ96JN0 433 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 EHD3Q9NZN3 535 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 PLLPQ9Y342 182 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 ABCA4P78363 2273 aa18.94■□□□□ 0.62
TRAPPC3-208ENST00000616074 ICOSLGO75144 302 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 UGT2B11O75310 529 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 OTCP00480 354 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 SBK3P0C264 359 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CSNK2A2P19784 350 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 DNASE1P24855 282 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CTSSP25774 331 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CNTFP26441 200 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CDH13P55290 713 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CKAP4Q07065 602 aaKnown RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 DAZAP2Q15038 168 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 LTB4RQ15722 352 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 TRMT12Q53H54 448 aaKnown RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 SLC30A6Q6NXT4 461 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 C9orf106Q8NAJ2 232 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 OR52R1Q8NGF1 315 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CTHRC1Q96CG8 243 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CNRIP1Q96F85 164 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 HBEGFQ99075 208 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 MRPL46Q9H2W6 279 aaKnown RBP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 CALHM2Q9HA72 323 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 BRF2Q9HAW0 419 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 KLRF1Q9NZS2 232 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 FETUBQ9UGM5 382 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZNF225Q9UK10 706 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 MAPRE3Q9UPY8 281 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 NIPBLQ6KC79 2804 aaeCLIP18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 ACANP16112 2415 aa18.93■□□□□ 0.62
TRAPPC3-208ENST00000616074 TUBAL3A6NHL2 446 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 A8MT66 165 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 EEF1E1-BLOC1S5C9J1V9 151 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 ACOX3O15254 700 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 EEF1E1O43324 174 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 ACTL6AO96019 429 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 RHOXF2BP0C7M4 288 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 COL6A2P12110 1019 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 KLK2P20151 261 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 OPRM1P35372 400 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 SLCO1A2P46721 670 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 SERPINB9P50453 376 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 MRPS35P82673 323 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 TAOK1Q7L7X3 1001 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 C1orf52Q8N6N3 182 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZPLD1Q8TCW7 415 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 POM121Q96HA1 1249 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZNF681Q96N22 645 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 MRPL57Q9BQC6 102 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 SERHLQ9NQF3 203 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 JKAMPQ9P055 326 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 SNX6Q9UNH7 406 aa18.92■□□□□ 0.62
TRAPPC3-208ENST00000616074 EPXP11678 715 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 PCSK2P16519 638 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 EMDP50402 254 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 PPP2R2AP63151 447 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 SNTA1Q13424 505 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 RCAN2Q14206 197 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms