RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PLOD2O00469 737 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 EMC8O43402 210 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 OR10H2O60403 315 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PLOD3O60568 738 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 DDAH2O95865 285 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 HEXBP07686 556 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ACP2P11117 423 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ETFAP13804 333 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NQO1P15559 274 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 DDX5P17844 614 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 GPX2P18283 190 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 TCN2P20062 427 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SSTR4P31391 388 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SOX11P35716 441 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PGM1P36871 562 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 DLSTP36957 453 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CCT3P49368 545 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 EMP2P54851 167 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 LIPEQ05469 1076 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 EEF1A2Q05639 463 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 FUT5Q11128 374 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CDC20Q12834 499 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 DNASE1L3Q13609 305 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 TP53BP2Q13625 1128 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SERTAD2Q14140 314 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF267Q14586 743 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 RGNQ15493 299 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NSDHLQ15738 373 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 MAPK11Q15759 364 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SPDYE7PQ495Y7 208 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SFT2D3Q587I9 215 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 TNFAIP8L2Q6P589 184 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 TMEM205Q6UW68 189 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SZRD1Q7Z422 152 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 C6orf120Q7Z4R8 191 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 WDR53Q7Z5U6 358 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NET1Q7Z628 596 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ARPINQ7Z6K5 226 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 RNF130Q86XS8 419 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PTOV1Q86YD1 416 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 HPS6Q86YV9 775 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 GALNT12Q8IXK2 581 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ZZZ3Q8IYH5 903 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ULK2Q8IYT8 1036 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 OR2L13Q8N349 312 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 VWA5B2Q8N398 1253 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NFAM1Q8NET5 270 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NUP43Q8NFH3 380 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 OR52N2Q8NGI0 321 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 OR10A6Q8NH74 314 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 FBXO30Q8TB52 745 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 C8orf44Q96CB5 159 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NEURL3Q96EH8 262 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SLC35G5Q96KT7 338 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 HOPXQ9BPY8 73 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 YIPF4Q9BSR8 244 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CRB3Q9BUF7 120 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CNPPD1Q9BV87 410 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NUDT9Q9BW91 350 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ADNPQ9H2P0 1102 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 KAT8Q9H7Z6 458 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 WDR54Q9H977 334 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SPAG4Q9NPE6 437 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ADAP2Q9NPF8 381 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 EQTNQ9NQ60 294 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ZCCHC3Q9NUD5 404 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 NDE1Q9NXR1 346 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ADA2Q9NZK5 511 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 SLC7A8Q9UHI5 535 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF223Q9UK11 482 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PADI1Q9ULC6 663 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PRPF19Q9UMS4 504 aaKnown RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PCDHGB4Q9UN71 923 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 C19orf53Q9UNZ5 99 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-205ENST00000614931 ERVK-19Q9WJR5 959 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PCDHGA6Q9Y5G7 932 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 HS3ST3B1Q9Y662 390 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 KCNE3Q9Y6H6 103 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 CPAMD8Q8IZJ3 1885 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 A0A087WV62 115 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 LOC102723996A0A087X1L8 192 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 A8MUI8 341 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 FAM220BPB1ANY3 271 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 C17orf105B2RV13 164 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 MASP2O00187 686 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 SOCS6O14544 535 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 DNAJA2O60884 412 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 TNFRSF21O75509 655 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 SEC24DO94855 1032 aaPredicted RBP7.47□□□□□ -1.21
PCDH9-205ENST00000614931 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 IFNA16P05015 189 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 HMGN2P05204 90 aaKnown RBP7.47□□□□□ -1.21
PCDH9-205ENST00000614931 IFI6P09912 130 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 RAB40ALP0C0E4 278 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 PRKAR1AP10644 381 aa7.47□□□□□ -1.21
PCDH9-205ENST00000614931 BMP2P12643 396 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms