RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TP53INP1Q96A56 240 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRMT61AQ96FX7 289 aaKnown RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MAPKAP1Q9BPZ7 522 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF556Q9HAH1 456 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SMURF1Q9HCE7 757 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SPASTQ9UBP0 616 aa10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MRPS7Q9Y2R9 242 aaKnown RBP10.26□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRBC2A0A5B9 178 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C10orf142B7Z368 130 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SYPP08247 313 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IL3P08700 152 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ETFAP13804 333 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TNNI3P19429 210 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 APEX1P27695 318 aaKnown RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PBLDP30039 288 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PTGS2P35354 604 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C2orf27AQ580R0 203 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CD300LDQ6UXZ3 194 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF852Q6ZMS4 543 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF366Q8N895 744 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C19orf18Q8NEA5 215 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SFXN5Q8TD22 340 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RGMAQ96B86 450 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OTUB1Q96FW1 271 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HDHD2Q9H0R4 259 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MVB12BQ9H7P6 319 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FZD3Q9NPG1 666 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RAB23Q9ULC3 237 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ASF1AQ9Y294 204 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRAV6A0A075B6T7 132 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 A0A0G2JMP0 313 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NCR1O76036 304 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PDE9AO76083 593 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PIPP12273 146 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PKLRP30613 574 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 DSTNP60981 165 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF45Q02386 682 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LRRC32Q14392 662 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LGI4Q8N135 537 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR10G2Q8NGC3 310 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRIM63Q969Q1 353 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CIDECQ96AQ7 238 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NLNQ9BYT8 704 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GALNT9Q9HCQ5 603 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 BCL2L10Q9HD36 194 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SIRT3Q9NTG7 399 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MCUBQ9NWR8 336 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NKIRAS2Q9NYR9 191 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MAP4K5Q9Y4K4 846 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM25AB3EWG3 89 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM25CB3EWG5 89 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FAM25GB3EWG6 89 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GPX5O75715 221 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POU3F3P20264 500 aaPredicted RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 AHRP35869 848 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PRDX1Q06830 199 aaKnown RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FBXO43Q4G163 708 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GPAT3Q53EU6 434 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC25A30Q5SVS4 291 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C19orf48Q6RUI8 117 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 UBE3DQ7Z6J8 389 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NUDT13Q86X67 352 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MOAP1Q96BY2 351 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TMEM106CQ9BVX2 250 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POLR2J2Q9GZM3 115 aaKnown RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PPIL3Q9H2H8 161 aaKnown RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CNOT2Q9NZN8 540 aaKnown RBP10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ANKDD1BA6NHY2 528 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLRG1O43660 514 aaKnown RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KAT7O95251 611 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IFI6P09912 130 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ALDH9A1P49189 494 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MAN2A2P49641 1150 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PRIM2P49643 509 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MC1RQ01726 317 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IL18Q14116 193 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CST6Q15828 149 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SNAPC1Q16533 368 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MRM1Q6IN84 353 aaKnown RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 WASH2PQ6VEQ5 465 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KRT74Q7RTS7 529 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LINC00471Q8N535 108 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IQCF1Q8N6M8 205 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GABRG3Q99928 467 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 BTBD1Q9H0C5 482 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RACGAP1Q9H0H5 632 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CXorf36Q9H7Y0 433 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLXND1Q9Y4D7 1925 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQL4 384 aaPredicted RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLD2O14939 933 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF250P15622 560 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CHMP24386 653 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms