RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 LRRC46Q96FV0 321 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 DGAT2Q96PD7 388 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ATG10Q9H0Y0 220 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PHRF1Q9P1Y6 1649 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CIB4A0PJX0 185 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ACOT7O00154 380 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SLC33A1O00400 549 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SPATA31D3P0C874 917 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 DRD5P21918 477 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 VEGFCP49767 419 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 DUSP3P51452 185 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 MLLT11Q13015 90 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 LRIT3Q3SXY7 679 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CDNFQ49AH0 187 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 FLYWCH1Q4VC44 716 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 UNC50Q53HI1 259 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SPATA31D4Q6ZUB0 917 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PARGQ86W56 976 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CILP2Q8IUL8 1156 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ENTHD1Q8IYW4 607 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CLDN22Q8N7P3 220 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 RASGEF1AQ8N9B8 481 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR2T33Q8NG76 320 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 BBS10Q8TAM1 723 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SLC35F5Q8WV83 523 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 DDX1Q92499 740 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 KCTD12Q96CX2 325 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF419Q96HQ0 510 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PIGMQ9H3S5 423 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SCPEP1Q9HB40 452 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 TXNL4BQ9NX01 149 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PEAK1Q9H792 1746 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SIGLEC1Q9BZZ2 1709 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 RPS10-NUDT3A0A1W2PQS6 291 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 IMPA2O14732 288 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF821O75541 412 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SOD2P04179 222 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 GCAP28676 217 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 RPS10P46783 165 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 FXYD6P3P58550 94 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 BAMBIQ13145 260 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 NHSL2Q5HYW2 709 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ACBD7Q8N6N7 88 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 KCNA7Q96RP8 456 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SORT1Q99523 831 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CRB3Q9BUF7 120 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 MEPEQ9NQ76 525 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SDR39U1Q9NRG7 319 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 COPS3Q9UNS2 423 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 HIF3AQ9Y2N7 669 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ROBO1Q9Y6N7 1651 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 LOC105369274A0A096LPK9 316 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR5K4A6NMS3 321 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF254O75437 659 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SNRNP70P08621 437 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OSMP13725 252 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 GLP1RP43220 463 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 MTNR1AP48039 350 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 NCBP2P52298 156 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 C1QTNF8P60827 252 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OGDHQ02218 1023 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PRKCZQ05513 592 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 LRIF1Q5T3J3 769 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 FIP1L1Q6UN15 594 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CEACAM20Q6UY09 585 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 RBM23Q86U06 439 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 C12orf40Q86WS4 652 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CACUL1Q86Y37 369 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR4N4Q8N0Y3 316 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 JAGN1Q8N5M9 183 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SUMF2Q8NBJ7 301 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR51G2Q8NGK0 314 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR4C15Q8NGM1 316 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR10Q1Q8NGQ4 319 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR10K1Q8NGX5 313 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SYT17Q9BSW7 474 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 EVA1AQ9H8M9 152 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 OR6C2Q9NZP2 312 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 KIF25Q9UIL4 384 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SNED1Q8TER0 1413 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ZNF142P52746 1687 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 YJEFN3A6XGL0 299 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 HSBP1L1C9JCN9 74 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 G3V2L1 256 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ARPC1BO15143 372 aaKnown RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 PRAMEF11O60813 436 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 CPNE6O95741 557 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 F2P00734 622 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SFTPBP07988 381 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SIRPB2Q5JXA9 342 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 SYT6Q5T7P8 510 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-211ENST00000613795 LIPJQ5W064 366 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 NRROSQ86YC3 692 aa6.56□□□□□ -1.36
CLCN3-211ENST00000613795 ZMIZ2Q8NF64 920 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms