RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 TNFRSF4P43489 277 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 NSFP46459 744 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 CAMLGP49069 296 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 RIPK4P57078 832 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 KCNK10P57789 538 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 RPL27P61353 136 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 HEPACAMQ14CZ8 416 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 OR1C1Q15619 314 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 CEBPEQ15744 281 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ANKRD55Q3KP44 614 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 LDLRAP1Q5SW96 308 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 WDR25Q64LD2 544 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 CGB2Q6NT52 195 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TMEM26Q6ZUK4 368 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 BNIPLQ7Z465 357 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ZNF491Q8N8L2 437 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 CCDC197Q8NCU1 140 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 OR1K1Q8NGR3 316 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 U2AF1L4Q8WU68 220 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 PNPLA2Q96AD5 504 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TMEM186Q96B77 213 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ZBED6CLQ96FA7 236 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 EEF2KMTQ96G04 330 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 RBM18Q96H35 190 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 PCED1BQ96HM7 432 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 GPR137Q96N19 417 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 AGPAT1Q99943 283 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 JPH2Q9BR39 696 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TTYH2Q9BSA4 534 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 FUNDC2Q9BWH2 189 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 SIRPDQ9H106 197 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TMEM245Q9H330 911 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 LIN28AQ9H9Z2 209 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ABCC13Q9NSE7 274 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TECRQ9NZ01 308 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 TRIM10Q9UDY6 481 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 KCNN3Q9UGI6 736 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 MLXQ9UH92 298 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 CIDEBQ9UHD4 219 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 HOOK1Q9UJC3 728 aaKnown RBP2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ERVK-19Q9WJR5 959 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 PLEKHA6Q9Y2H5 1048 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 ATG4BQ9Y4P1 393 aa2.4□□□□□ -2.03
TARDBP-214ENST00000613177 RAD54L2Q9Y4B4 1467 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 NPC1L1Q9UHC9 1359 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TRBV2A0A0J9YWF9 115 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TMEM89A2RUT3 159 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 RGSL1A5PLK6 1076 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ZSCAN5CA6NGD5 496 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 MCF2LO15068 1137 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ADAM12O43184 909 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 LRP3O75074 770 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TXNDC12O95881 172 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 IGHG3P01860 377 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 PGK2P07205 417 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 FCGR3AP08637 254 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TPBGLP0DKB5 382 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 FUT1P19526 365 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 PTMSP20962 102 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ACP1P24666 158 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 MARCKSP29966 332 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ID1P41134 155 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 MEOX2P50222 304 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 HMGCS2P54868 508 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 NLRP11P59045 1033 aaKnown RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 GSTO1P78417 241 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TSTA3Q13630 321 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SMC1AQ14683 1233 aaKnown RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ABRAXAS2Q15018 415 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CARTPTQ16568 116 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CCDC40Q4G0X9 1142 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SLC22A6Q4U2R8 563 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TOR1AIP1Q5JTV8 583 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 NEK5Q6P3R8 708 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CD164L2Q6UWJ8 174 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ABRAXAS1Q6UWZ7 409 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ARL14Q8N4G2 192 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 HDDC3Q8N4P3 179 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 MRPL43Q8N983 215 aaKnown RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CNNM3Q8NE01 707 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TBCKQ8TEA7 893 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 GLYATL1Q969I3 302 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ZNF799Q96GE5 643 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 PPP1R16AQ96I34 528 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SAMD8Q96LT4 415 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 NSMCE2Q96MF7 247 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 MCCC1Q96RQ3 725 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 COQ7Q99807 217 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SPAG8Q99932 426 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 DEFB126Q9BYW3 111 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 WWP1Q9H0M0 922 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SLC26A1Q9H2B4 701 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 SOHLH2Q9NX45 425 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 VNN3Q9NY84 501 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CNOT2Q9NZN8 540 aaKnown RBP2.39□□□□□ -2.03
TARDBP-214ENST00000613177 ACTR3BQ9P1U1 418 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 CCPG1Q9ULG6 757 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 RNF24Q9Y225 148 aa2.39□□□□□ -2.03
TARDBP-214ENST00000613177 TRIOBPQ9H2D6 2365 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms