RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 ZNF551Q7Z340 670 aaPredicted RBP11.65□□□□□ -0.54
CSTF1-208ENST00000613138 TMEM251Q8N6I4 163 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 FAM98AQ8NCA5 519 aaKnown RBP11.65□□□□□ -0.54
CSTF1-208ENST00000613138 OR4N2Q8NGD1 307 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 PPP1R14CQ8TAE6 165 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 PGM2Q96G03 612 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 BBS4Q96RK4 519 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 TMBIM4Q9HC24 238 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 SACM1LQ9NTJ5 587 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 CNOT11Q9UKZ1 510 aaKnown RBP11.65□□□□□ -0.54
CSTF1-208ENST00000613138 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 ENTPD4Q9Y227 616 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 NPFFR2Q9Y5X5 522 aa11.65□□□□□ -0.54
CSTF1-208ENST00000613138 PHF3Q92576 2039 aaKnown RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 NPIPB8E9PQR5 432 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 H3BQF6 201 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 SLC19A2O60779 497 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 GLSO94925 669 aaPredicted RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 HSPA4LO95757 839 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 P04436 131 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 SERPINE1P05121 402 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 ABCD3P28288 659 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 CDSNQ15517 529 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 CEBPEQ15744 281 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 NTRK2Q16620 822 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.64□□□□□ -0.556e-7■■■■□ 26.5
CSTF1-208ENST00000613138 SPPL2CQ8IUH8 684 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 GPALPP1Q8IXQ4 340 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 LIX1Q8N485 282 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 RPRMLQ8N4K4 120 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 KRTCAP2Q8N6L1 136 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 GOLM1Q8NBJ4 401 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 OR7G1Q8NGA0 311 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 OR7A2PQ8NGA2 310 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 ZNF675Q8TD23 568 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 PAQR8Q8TEZ7 354 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 TLCD1Q96CP7 247 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 OMA1Q96E52 524 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 JSRP1Q96MG2 331 aaPredicted RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 NODALQ96S42 347 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 FOLH1BQ9HBA9 442 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 EML4Q9HC35 981 aaKnown RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 SSU72Q9NP77 194 aaKnown RBP11.64□□□□□ -0.55
CSTF1-208ENST00000613138 MIEF1Q9NQG6 463 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 PNPOQ9NVS9 261 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.553e-9■■■■□ 21.8
CSTF1-208ENST00000613138 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
CSTF1-208ENST00000613138 ARHGAP21Q5T5U3 1957 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 WIPF3A6NGB9 483 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CCL21O00585 134 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 TM9SF1O15321 606 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CHEK2O96017 543 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
CSTF1-208ENST00000613138 MYZAPP0CAP1 466 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 NEFHP12036 1026 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 SLC1A6P48664 564 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CDK9P50750 372 aaKnown RBP11.63□□□□□ -0.55
CSTF1-208ENST00000613138 BST1Q10588 318 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 HSPB3Q12988 150 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CASP8Q14790 479 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 PTGR1Q14914 329 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 C6orf136Q5SQH8 315 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 SLC22A10Q63ZE4 541 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 RNF165Q6ZSG1 346 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 FBXW8Q8N3Y1 598 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 FAM76AQ8TAV0 307 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 DIO2Q92813 273 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 HGDQ93099 445 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 TMBIM1Q969X1 311 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 OTUB1Q96FW1 271 aaPredicted RBP11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CCDC120Q96HB5 630 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 AMDHD1Q96NU7 426 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 CCT7Q99832 543 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 GALNT9Q9HCQ5 603 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 GIMAP4Q9NUV9 329 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 FLRT3Q9NZU0 649 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
CSTF1-208ENST00000613138 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.63□□□□□ -0.55
CSTF1-208ENST00000613138 B4DXG7 233 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 UPK1AO00322 258 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 BIRC5O15392 142 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 UGT2B11O75310 529 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 ERLIN1O75477 346 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 ZWINTO95229 277 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 TUBBP07437 444 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 PTGDSP41222 190 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 CA7P43166 264 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 TRPC1P48995 793 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 PER3P56645 1201 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 ADORA2A-AS1P86434 159 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 PLCXD2Q0VAA5 305 aa11.62□□□□□ -0.55
CSTF1-208ENST00000613138 ZNF155Q12901 538 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms