RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 METAP1P53582 386 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 IL24Q13007 206 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FHL1Q13642 323 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 EXOSC2Q13868 293 aaKnown RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FAM72AQ5TYM5 149 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FAM72DQ6L9T8 149 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 RHBDD2Q6NTF9 364 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 WASH2PQ6VEQ5 465 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 Q6ZSR9 355 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 CENPUQ71F23 418 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 RUFY3Q7L099 469 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 LPCAT2Q7L5N7 544 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FAM72BQ86X60 149 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 TBC1D10CQ8IV04 446 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC36Q8IYA8 594 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 STEAP2Q8NFT2 490 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FBXO25Q8TCJ0 367 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SLCO2A1Q92959 643 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF300Q96RE9 604 aaPredicted RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SH3GL3Q99963 347 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 CAPS2Q9BXY5 557 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 AGPAT5Q9NUQ2 364 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SMPD3Q9NY59 655 aaPredicted RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 NLGN3Q9NZ94 848 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FZR1Q9UM11 496 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 TCF19Q9Y242 345 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 MRPS18CQ9Y3D5 142 aaKnown RBP4.35□□□□□ -1.71
LINC00397-202ENST00000606785 FKBP7Q9Y680 259 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 TMEM94Q12767 1356 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SMARCA2P51531 1590 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 SCRIBQ14160 1630 aa4.35□□□□□ -1.71
LINC00397-202ENST00000606785 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 A8MUI8 341 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 K7EQM0 130 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CASQ2O14958 399 aaPredicted RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 MTX2O75431 263 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 MBD3O95983 291 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CHRNA1P02708 482 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 SLC35G4P0C7Q5 338 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 GNB3P16520 340 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 TSPAN8P19075 237 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CHRNB4P30926 498 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 RPL9P32969 192 aaKnown RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 ID1P41134 155 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CRYBA2P53672 197 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CTAG1AP78358 180 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 DHODHQ02127 395 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 SRYQ05066 204 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 RIPK1Q13546 671 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 ENPP2Q13822 863 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 TCHHL1Q5QJ38 904 aaPredicted RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 HHATQ5VTY9 493 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CHDHQ8NE62 594 aaPredicted RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 NFAM1Q8NET5 270 aaPredicted RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 OR2T3Q8NH03 318 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 MRGPRDQ8TDS7 321 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 HPDLQ96IR7 371 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF607Q96SK3 696 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 TBCDQ9BTW9 1192 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 CLEC7AQ9BXN2 247 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 FANCFQ9NPI8 374 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 TRAF3IP3Q9Y228 551 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 KLF2Q9Y5W3 355 aaPredicted RBP4.34□□□□□ -1.71
LINC00397-202ENST00000606785 AFF2P51816 1311 aa4.34□□□□□ -1.71
LINC00397-202ENST00000606785 SYNJ2O15056 1496 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 C15orf38-AP3S2A0A0A6YYH1 394 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 NEDD8-MDP1E9PL57 170 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 H0YL77 283 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 K7EQD1 137 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 CXCL11O14625 94 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 ALOX15BO15296 676 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 KLHL41O60662 606 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 SDC3O75056 442 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 NXPH2O95156 264 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 STAMBPO95630 424 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 CSF2P04141 144 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 PATE4P0C8F1 98 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 PBLDP30039 288 aaPredicted RBP4.33□□□□□ -1.72
LINC00397-202ENST00000606785 FCGR2CP31995 323 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 CA8P35219 290 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 OPRL1P41146 370 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 PTGER3P43115 390 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 SNRPD1P62314 119 aaKnown RBP4.33□□□□□ -1.72
LINC00397-202ENST00000606785 CDKN3Q16667 212 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 HLA-BQ31612 363 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 BOLA3Q53S33 107 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 DMKNQ6E0U4 476 aaPredicted RBP4.33□□□□□ -1.72
LINC00397-202ENST00000606785 ZCCHC7Q8N3Z6 543 aaKnown RBP4.33□□□□□ -1.72
LINC00397-202ENST00000606785 OR10G7Q8NGN6 311 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 CCDC26Q8TAB7 109 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 RLN3Q8WXF3 142 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
LINC00397-202ENST00000606785 GMPPAQ96IJ6 420 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms