RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 C1orf52Q8N6N3 182 aaKnown RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 RELL2Q8NC24 303 aaPredicted RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 OR52R1Q8NGF1 315 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 OR1J4Q8NGS1 313 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 ZNF592Q92610 1267 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 NRGNQ92686 78 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 HGDQ93099 445 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 OMA1Q96E52 524 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 HSPBAP1Q96EW2 488 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 CNRIP1Q96F85 164 aaPredicted RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 LCORQ96JN0 433 aaPredicted RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 NODALQ96S42 347 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 HBEGFQ99075 208 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 FAIM2Q9BWQ8 316 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 EPB41L4BQ9H329 900 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 METTL7AQ9H8H3 244 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 CALHM2Q9HA72 323 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 DNAJB12Q9NXW2 375 aaKnown RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 TMEM216Q9P0N5 145 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 HEY2Q9UBP5 337 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 ZNF629Q9UEG4 869 aaPredicted RBP6.96□□□□□ -1.3
CUX1-219ENST00000606749 FETUBQ9UGM5 382 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 TRPS1Q9UHF7 1281 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 PLLPQ9Y342 182 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 ZNF780BQ9Y6R6 833 aa6.96□□□□□ -1.3
CUX1-219ENST00000606749 ARHGAP21Q5T5U3 1957 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CD8B2A6NJW9 211 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 DVL2O14641 736 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 TO15178 435 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ACOX3O15254 700 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 UGT2B11O75310 529 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ULK1O75385 1050 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CBR3O75828 277 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 KRT6AP02538 564 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 KRT6BP04259 564 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CTAGE8P0CG41 777 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 HSD3B1P14060 373 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CD1EP15812 388 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 PCSK2P16519 638 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 TAC1P20366 129 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 IMPDH1P20839 514 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 BMP5P22003 454 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 HSD3B2P26439 372 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 UQCRC1P31930 480 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 PEX19P40855 299 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 PPICP45877 212 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 KRT6CP48668 564 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ALDH9A1P49189 494 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ZNF136P52737 540 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 IST1P53990 364 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 DCAF7P61962 342 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 RAE1P78406 368 aaKnown RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 SNTA1Q13424 505 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 RASA2Q15283 850 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 LTB4RQ15722 352 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 NNATQ16517 81 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 FBXL19-AS1Q494R0 122 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 TCHHL1Q5QJ38 904 aaPredicted RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 DCST1Q5T197 706 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ANGPTL8Q6UXH0 198 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 YRDCQ86U90 279 aaKnown RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 CTAGE4Q8IX94 777 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ZZZ3Q8IYH5 903 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CCDC116Q8IYX3 515 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CDYL2Q8N8U2 506 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 WDSUB1Q8N9V3 476 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 FAM83FQ8NEG4 500 aaPredicted RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 MNS1Q8NEH6 495 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 METTL6Q8TCB7 284 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ZPLD1Q8TCW7 415 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 RNASE6Q93091 150 aaKnown RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 KLHL29Q96CT2 875 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 MTBPQ96DY7 904 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ZNF382Q96SR6 550 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 SH3GL2Q99962 352 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ITPAQ9BY32 194 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 UGT2B28Q9BY64 529 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 POLDIP3Q9BY77 421 aaKnown RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 LIME1Q9H400 295 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 ANKRA2Q9H9E1 313 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 GALNT9Q9HCQ5 603 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 PRODH2Q9UF12 536 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 UTS2RQ9UKP6 389 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 EXO1Q9UQ84 846 aaKnown RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 CAMK2AQ9UQM7 478 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 DLGAP4Q9Y2H0 992 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 GPR55Q9Y2T6 319 aaPredicted RBP6.95□□□□□ -1.3
CUX1-219ENST00000606749 POLQO75417 2590 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 MED13LQ71F56 2210 aa6.95□□□□□ -1.3
CUX1-219ENST00000606749 HIVEP1P15822 2718 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 F8P00451 2351 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 EXOC1LA0A1B0GW35 172 aa6.94□□□□□ -1.3
CUX1-219ENST00000606749 MBD3L4A6NDZ8 208 aaPredicted RBP6.94□□□□□ -1.3
CUX1-219ENST00000606749 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms