RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MBD3L3A6NE82 208 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 TUBAL3A6NHL2 446 aa12□□□□□ -0.49
RPS28-204ENST00000602140 MBD3L5A6NJ08 208 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
RPS28-204ENST00000602140 EEF1E1O43324 174 aaKnown RBP12□□□□□ -0.49
RPS28-204ENST00000602140 ICOSLGO75144 302 aa12□□□□□ -0.49
RPS28-204ENST00000602140 OTCP00480 354 aa12□□□□□ -0.49
RPS28-204ENST00000602140 PDYNP01213 254 aa12□□□□□ -0.49
RPS28-204ENST00000602140 ATP1B1P05026 303 aa12□□□□□ -0.49
RPS28-204ENST00000602140 RPS17P08708 135 aaKnown RBP12□□□□□ -0.49
RPS28-204ENST00000602140 TSPAN8P19075 237 aa12□□□□□ -0.49
RPS28-204ENST00000602140 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 DNASE1P24855 282 aa12□□□□□ -0.49
RPS28-204ENST00000602140 CTSSP25774 331 aa12□□□□□ -0.49
RPS28-204ENST00000602140 CDH13P55290 713 aa12□□□□□ -0.49
RPS28-204ENST00000602140 DUSP2Q05923 314 aa12□□□□□ -0.49
RPS28-204ENST00000602140 GALNT1Q10472 559 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 RCAN2Q14206 197 aa12□□□□□ -0.49
RPS28-204ENST00000602140 TSNAXIP1Q2TAA8 658 aa12□□□□□ -0.49
RPS28-204ENST00000602140 FAM219BQ5XKK7 198 aa12□□□□□ -0.49
RPS28-204ENST00000602140 SLC30A6Q6NXT4 461 aa12□□□□□ -0.49
RPS28-204ENST00000602140 FAM180BQ6P0A1 224 aa12□□□□□ -0.49
RPS28-204ENST00000602140 LETMD1Q6P1Q0 360 aa12□□□□□ -0.49
RPS28-204ENST00000602140 TMEM81Q6P7N7 255 aa12□□□□□ -0.49
RPS28-204ENST00000602140 MBD3L2Q8NHZ7 208 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 SELENOMQ8WWX9 145 aa12□□□□□ -0.49
RPS28-204ENST00000602140 HGDQ93099 445 aa12□□□□□ -0.49
RPS28-204ENST00000602140 TM4SF18Q96CE8 201 aa12□□□□□ -0.49
RPS28-204ENST00000602140 KLHL29Q96CT2 875 aa12□□□□□ -0.49
RPS28-204ENST00000602140 OMA1Q96E52 524 aa12□□□□□ -0.49
RPS28-204ENST00000602140 LCORQ96JN0 433 aaPredicted RBP12□□□□□ -0.49
RPS28-204ENST00000602140 PAFAH2Q99487 392 aa12□□□□□ -0.49
RPS28-204ENST00000602140 OSBPL11Q9BXB4 747 aa12□□□□□ -0.49
RPS28-204ENST00000602140 FUT8Q9BYC5 575 aa12□□□□□ -0.49
RPS28-204ENST00000602140 CALHM2Q9HA72 323 aa12□□□□□ -0.49
RPS28-204ENST00000602140 GALNT9Q9HCQ5 603 aa12□□□□□ -0.49
RPS28-204ENST00000602140 EHD3Q9NZN3 535 aa12□□□□□ -0.49
RPS28-204ENST00000602140 KLRF1Q9NZS2 232 aa12□□□□□ -0.49
RPS28-204ENST00000602140 ZNF639Q9UID6 485 aa12□□□□□ -0.49
RPS28-204ENST00000602140 PSME2Q9UL46 239 aa12□□□□□ -0.49
RPS28-204ENST00000602140 EDARQ9UNE0 448 aa12□□□□□ -0.49
RPS28-204ENST00000602140 MAPRE3Q9UPY8 281 aa12□□□□□ -0.49
RPS28-204ENST00000602140 PLLPQ9Y342 182 aa12□□□□□ -0.49
RPS28-204ENST00000602140 KIAA1549Q9HCM3 1950 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 SNPHO15079 494 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 UGT2B11O75310 529 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 CBX7O95931 251 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 ACTL6AO96019 429 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 EPXP11678 715 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 COL6A2P12110 1019 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 KLK2P20151 261 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 CNTFP26441 200 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 OPRM1P35372 400 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 SOX18P35713 384 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 PTGDSP41222 190 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 ALDH9A1P49189 494 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 SERPINB9P50453 376 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 DGKQP52824 942 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 PPP2R2AP63151 447 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 CKAP4Q07065 602 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 PLCXD2Q0VAA5 305 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 DAZAP2Q15038 168 aaPredicted RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 LTB4RQ15722 352 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 TRMT12Q53H54 448 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 FBXW10Q5XX13 1052 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 TAOK1Q7L7X3 1001 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 KIF18BQ86Y91 864 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 LINC01560Q8TB33 94 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 ZPLD1Q8TCW7 415 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 HBEGFQ99075 208 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 MRPL57Q9BQC6 102 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 CDC42EP4Q9H3Q1 356 aaKnown RBP11.99□□□□□ -0.49
RPS28-204ENST00000602140 BRF2Q9HAW0 419 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 SERHLQ9NQF3 203 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 FETUBQ9UGM5 382 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 SNX6Q9UNH7 406 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.99□□□□□ -0.492e-16■■□□□ 11.8
RPS28-204ENST00000602140 ZNF780BQ9Y6R6 833 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
RPS28-204ENST00000602140 AKAP6Q13023 2319 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 PRAMEF25A6NGN4 478 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 A8MT66 165 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 POC1B-GALNT4F8VUJ3 575 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 ACOX3O15254 700 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 CBR3O75828 277 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 OR4F21O95013 312 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 IL18BPO95998 194 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 RHOXF2BP0C7M4 288 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 TMIGD3P0DMS9 266 aaPredicted RBP11.98□□□□□ -0.49
RPS28-204ENST00000602140 CYP4B1P13584 511 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 PCSK2P16519 638 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 DRD5P21918 477 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 GCKP35557 465 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms