RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MASP1P48740 699 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 CDK9P50750 372 aaKnown RBP14.47□□□□□ -0.09
VRK3-221ENST00000600284 PSPHP78330 225 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 RAE1P78406 368 aaKnown RBP14.47□□□□□ -0.09
VRK3-221ENST00000600284 TLE4Q04727 773 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 ACSM2AQ08AH3 577 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 DUSP8Q13202 625 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 SLC25A35Q3KQZ1 300 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 TRMT12Q53H54 448 aaKnown RBP14.47□□□□□ -0.09
VRK3-221ENST00000600284 NHSL2Q5HYW2 709 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 FNDC7Q5VTL7 733 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 ACSM2BQ68CK6 577 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 TIGD3Q6B0B8 471 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 SLC30A6Q6NXT4 461 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 PM20D2Q8IYS1 436 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 ULK2Q8IYT8 1036 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 PRR22Q8IZ63 422 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 CLYBLQ8N0X4 340 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 OR52R1Q8NGF1 315 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 C11orf24Q96F05 449 aaPredicted RBP14.47□□□□□ -0.09
VRK3-221ENST00000600284 ITPAQ9BY32 194 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 GSTO2Q9H4Y5 243 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 HEY2Q9UBP5 337 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 Q9UFV3 132 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 TBK1Q9UHD2 729 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 C15orf41Q9Y2V0 281 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 PDZD2O15018 2839 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 GNG14A0A1W2PPG7 69 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 HSPB2A8KAH6 182 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 GLRA3O75311 464 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 TRAPPC6AO75865 159 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 IL3P08700 152 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 CHN1P15882 459 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 CCT5P48643 541 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 TRPC1P48995 793 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 EMDP50402 254 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 DUSP2Q05923 314 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 EXOSC7Q15024 291 aaKnown RBP14.46□□□□□ -0.09
VRK3-221ENST00000600284 CEBPEQ15744 281 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 HSPB2Q16082 182 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 CCDC153Q494R4 210 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 ZNF628Q5EBL2 1059 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 BICRALQ6AI39 1079 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 SH2D5Q6ZV89 423 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 CCDC116Q8IYX3 515 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 ADCY4Q8NFM4 1077 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 C16orf78Q8WTQ4 265 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 HGDQ93099 445 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 OMA1Q96E52 524 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 APIPQ96GX9 242 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 GNRHR2Q96P88 292 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 TIMP4Q99727 224 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 METTL7AQ9H8H3 244 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 GIMAP4Q9NUV9 329 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 KCNN3Q9UGI6 736 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 GPR55Q9Y2T6 319 aaPredicted RBP14.46□□□□□ -0.09
VRK3-221ENST00000600284 PLLPQ9Y342 182 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 DCHS2Q6V1P9 2916 aa14.46□□□□□ -0.09
VRK3-221ENST00000600284 C15orf38-AP3S2A0A0A6YYH1 394 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 FRG2CA6NGY1 282 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 G3V2L1 256 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 ABCB7O75027 752 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 EPPINO95925 133 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 MYL2P10916 166 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 PCSK2P16519 638 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 PTPN6P29350 595 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 TIA1P31483 386 aaKnown RBP eCLIP14.45□□□□□ -0.1
VRK3-221ENST00000600284 MPIP34949 423 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 ADH7P40394 386 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 HTR6P50406 440 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 DNAJB13P59910 316 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 HMGCS1Q01581 520 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 CRYZQ08257 329 aaKnown RBP14.45□□□□□ -0.1
VRK3-221ENST00000600284 PLCXD2Q0VAA5 305 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 VASNQ6EMK4 673 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 ZYG11AQ6WRX3 759 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 TDRPQ86YL5 185 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 OR1J4Q8NGS1 313 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 FAM76AQ8TAV0 307 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.45□□□□□ -0.1
VRK3-221ENST00000600284 TMCO6Q96DC7 493 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 TRIM44Q96DX7 344 aaPredicted RBP14.45□□□□□ -0.1
VRK3-221ENST00000600284 PRDM14Q9GZV8 571 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 MID1IP1Q9NPA3 183 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 PFDN4Q9NQP4 134 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 SLC35C2Q9NQQ7 365 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 EMCNQ9ULC0 261 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 WBP11Q9Y2W2 641 aaKnown RBP14.45□□□□□ -0.1
VRK3-221ENST00000600284 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
VRK3-221ENST00000600284 HCFC1P51610 2035 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 OR6C70A6NIJ9 312 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 PLOD3O60568 738 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 ICOSLGO75144 302 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 ANXA4P09525 319 aaPredicted RBP14.44□□□□□ -0.1
VRK3-221ENST00000600284 TIMP3P35625 211 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 PEX19P40855 299 aa14.44□□□□□ -0.1
VRK3-221ENST00000600284 MRPS35P82673 323 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms