RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SRSF5Q13243 272 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 SNAPC1Q16533 368 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 FAM214AQ32MH5 1076 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF311Q5JNZ3 666 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PODNL1Q6PEZ8 512 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 AKAP14Q86UN6 197 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ALDH16A1Q8IZ83 802 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR4K5Q8NGD3 323 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ADAMTS15Q8TE58 950 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 IPCEF1Q8WWN9 437 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 WASH6PQ9NQA3 447 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR2A25A4D2G3 310 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 SOBPA7XYQ1 873 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 AQP9O43315 295 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 DNAJB5O75953 348 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PDE9AO76083 593 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 SEMA3DO95025 777 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 GABARAPO95166 117 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CHRM4P08173 479 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 BMP4P12644 408 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CSNK2A2P19784 350 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 IGFBP4P22692 258 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ELAVL4P26378 380 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ATP6V1E1P36543 226 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 HSD17B2P37059 387 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 INAVAQ3KP66 663 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 NUP43Q8NFH3 380 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 RPLP0P6Q8NHW5 317 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC38A4Q969I6 547 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 RELTQ969Z4 430 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 MENTQ9BUN1 341 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 EGLN3Q9H6Z9 239 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CARD8Q9Y2G2 431 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 DOCK8Q8NF50 2099 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 TMEM221A6NGB7 291 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 FCMRO60667 390 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CCNKO75909 580 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CDK1P06493 297 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 JUNDP17535 347 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PEBP1P30086 187 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 TRIM23P36406 574 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 MLIPQ5VWP3 458 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ABHD17CQ6PCB6 329 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 BEX2Q9BXY8 128 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 MCOLN1Q9GZU1 580 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PIAS3Q9Y6X2 628 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 COLEC10Q9Y6Z7 277 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 M0R082 166 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 LRRTM2O43300 516 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 CLEC3AO75596 197 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 PKLRP30613 574 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 GINS1Q14691 196 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 SYT6Q5T7P8 510 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF730Q6ZMV8 503 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZFP41Q8N8Y5 198 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 CREB3L4Q8TEY5 395 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 RLN3Q8WXF3 142 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ART5Q96L15 291 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 HSPE1-MOB4S4R3N1 261 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 TCRBV21S2A2A0A5A6 115 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 RECKO95980 971 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 MPIP34949 423 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 PXNP49023 591 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 KHKP50053 298 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC16A1P53985 500 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 RGS8P57771 180 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ATAD3BQ5T9A4 648 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 UBE2UQ5VVX9 321 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 TYW3Q6IPR3 259 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 DHRS4L2Q6PKH6 230 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 PRSS41Q7RTY9 318 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF354BQ96LW1 612 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 MGLLQ99685 303 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 PITX2Q99697 317 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 C1QTNF2Q9BXJ5 285 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 TCEAL2Q9H3H9 227 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 EHD3Q9NZN3 535 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 KIR2DL1P43626 348 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 GPR4P46093 362 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 TGM4P49221 684 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 PCBP4P57723 403 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 CXCR4P61073 352 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 TGM3Q08188 693 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF362Q5T0B9 420 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 THOC7Q6I9Y2 204 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 SMARCD3Q6STE5 483 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC16A11Q8NCK7 471 aa10.86□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR2L5Q8NG80 312 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms