RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SLC24A3Q9HC58 644 aa17.2■□□□□ 0.34
PNKP-213ENST00000599543 MID1IP1Q9NPA3 183 aa17.2■□□□□ 0.34
PNKP-213ENST00000599543 ACKR4Q9NPB9 350 aa17.2■□□□□ 0.34
PNKP-213ENST00000599543 KCNK9Q9NPC2 374 aa17.2■□□□□ 0.34
PNKP-213ENST00000599543 Q9UFV3 132 aa17.2■□□□□ 0.34
PNKP-213ENST00000599543 WDR91A4D1P6 747 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 ANKRD33BA6NCL7 494 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 PDYNP01213 254 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 CPMP14384 443 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 NT5EP21589 574 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 XKP51811 444 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 MAPK12P53778 367 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 FOXA1P55317 472 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 FBXW4P57775 412 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 DNAJB13P59910 316 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 FUT7Q11130 342 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 LCP2Q13094 533 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 MYBPHQ13203 477 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 MPP2Q14168 576 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 LIPMQ5VYY2 423 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 TMEM64Q6YI46 380 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 FRMD7Q6ZUT3 714 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 TMEM200AQ86VY9 491 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 OR10A5Q9H207 317 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 KCNN3Q9UGI6 736 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 TRPS1Q9UHF7 1281 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 SLC12A4Q9UP95 1085 aa17.19■□□□□ 0.34
PNKP-213ENST00000599543 C15orf38-AP3S2A0A0A6YYH1 394 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 MANBAO00462 879 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 GUCY1B2O75343 617 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 CT62P0C5K7 136 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 MYZAPP0CAP1 466 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 CHN1P15882 459 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 HMOX2P30519 316 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 ADH7P40394 386 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 TRPC1P48995 793 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 RPP38P78345 283 aaKnown RBP17.18■□□□□ 0.34
PNKP-213ENST00000599543 SLC25A35Q3KQZ1 300 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 TNFAIP8L3Q5GJ75 292 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 CES4AQ5XG92 561 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 COMMD6Q7Z4G1 85 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 WDR53Q7Z5U6 358 aaPredicted RBP17.18■□□□□ 0.34
PNKP-213ENST00000599543 METTL4Q8N3J2 472 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 ANKRD42Q8N9B4 389 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 OR7G1Q8NGA0 311 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 SELENOMQ8WWX9 145 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 PGM2Q96G03 612 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 RILPQ96NA2 401 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 SENP1Q9P0U3 644 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 MID2Q9UJV3 735 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 FIS1Q9Y3D6 152 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 PCDHGB3Q9Y5G1 929 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 NPFFR2Q9Y5X5 522 aa17.18■□□□□ 0.34
PNKP-213ENST00000599543 GOLGA6L10A6NI86 522 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 TRIM13O60858 407 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 TRIM3O75382 744 aaPredicted RBP17.17■□□□□ 0.34
PNKP-213ENST00000599543 TRAPPC6AO75865 159 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 SNX4O95219 450 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 CHRNGP07510 517 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 H2AFXP16104 143 aaPredicted RBP17.17■□□□□ 0.34
PNKP-213ENST00000599543 PORP16435 677 aaPredicted RBP17.17■□□□□ 0.34
PNKP-213ENST00000599543 MASP1P48740 699 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 RIPPLY2Q5TAB7 128 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 BICRALQ6AI39 1079 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 PACS2Q86VP3 889 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 ULK2Q8IYT8 1036 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 VWA5B2Q8N398 1253 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 ZNF615Q8N8J6 731 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 C17orf47Q8NEP4 570 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 METTL6Q8TCB7 284 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 SPPL2AQ8TCT8 520 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 SECISBP2Q96T21 854 aaKnown RBP17.17■□□□□ 0.34
PNKP-213ENST00000599543 TMBIM4Q9HC24 238 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 SNX6Q9UNH7 406 aa17.17■□□□□ 0.34
PNKP-213ENST00000599543 AKAP6Q13023 2319 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 C1orf226A1L170 272 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 ZWINTO95229 277 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 PKNOX1P55347 436 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 MAGOHP61326 146 aaKnown RBP17.16■□□□□ 0.34
PNKP-213ENST00000599543 DUSP8Q13202 625 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 CLEC6AQ6EIG7 209 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 SLC48A1Q6P1K1 146 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 LIX1LQ8IVB5 337 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 PRR22Q8IZ63 422 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 MGARPQ8TDB4 240 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 ADIPOR1Q96A54 375 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 ARL8AQ96BM9 186 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 BRINP2Q9C0B6 783 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 BRF2Q9HAW0 419 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 NMRK1Q9NWW6 199 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 CFL2Q9Y281 166 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 PCDHA9Q9Y5H5 950 aa17.16■□□□□ 0.34
PNKP-213ENST00000599543 HSPB2A8KAH6 182 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 ERAL1O75616 437 aaKnown RBP17.15■□□□□ 0.34
PNKP-213ENST00000599543 ESRRBO95718 433 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 BPGMP07738 259 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 GPX3P22352 226 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 ABCD3P28288 659 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 ARRB2P32121 409 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 ETV4P43268 484 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms