RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SLC22A9Q8IVM8 553 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 TAGAPQ8N103 731 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 VWA5B2Q8N398 1253 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 DIO2Q92813 273 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 ADIPOR1Q96A54 375 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 CNRIP1Q96F85 164 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-203ENST00000598359 APIPQ96GX9 242 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 EBPLQ9BY08 206 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 SHCBP1LQ9BZQ2 653 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 NXF5Q9H1B4 397 aaKnown RBP12.64□□□□□ -0.39
SCAF1-203ENST00000598359 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 TP63Q9H3D4 680 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-203ENST00000598359 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 EXO5Q9H790 373 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 ANKRA2Q9H9E1 313 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 ZFP64Q9NPA5 681 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 MAT2BQ9NZL9 334 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 BCAP29Q9UHQ4 241 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 NPFFR2Q9Y5X5 522 aa12.64□□□□□ -0.39
SCAF1-203ENST00000598359 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 PCDH7O60245 1069 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 PROCP04070 461 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 MYL2P10916 166 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 PCSK2P16519 638 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ENDOUP21128 410 aaKnown RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 GPX3P22352 226 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 TRPC1P48995 793 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 MAN2A2P49641 1150 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 NUP107P57740 925 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 MRPS35P82673 323 aaKnown RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 HYAL4Q2M3T9 481 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 TRMT12Q53H54 448 aaKnown RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 C6orf89Q6UWU4 347 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ZYG11AQ6WRX3 759 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 CA5BP1Q8WTZ4 195 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 APOPT1Q96IL0 206 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF681Q96N22 645 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 DOHHQ9BU89 302 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ITPAQ9BY32 194 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 UCK2Q9BZX2 261 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF703Q9H7S9 590 aaPredicted RBP12.63□□□□□ -0.39
SCAF1-203ENST00000598359 TNFRSF12AQ9NP84 129 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 PFDN4Q9NQP4 134 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 NMRK1Q9NWW6 199 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 EHD3Q9NZN3 535 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 CNIH4Q9P003 139 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 DLGAP4Q9Y2H0 992 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 DCHS2Q6V1P9 2916 aa12.63□□□□□ -0.39
SCAF1-203ENST00000598359 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 A0A1B0GVC2 190 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 GNG14A0A1W2PPG7 69 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 GLRA3O75311 464 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 CBX7O95931 251 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ATP1B1P05026 303 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ENO1P06733 434 aaKnown RBP12.62□□□□□ -0.39
SCAF1-203ENST00000598359 DHRS4L1P0CG22 281 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 HSD3B1P14060 373 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 KRT4P19013 534 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 HSD3B2P26439 372 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 NAGLUP54802 743 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 PKNOX1P55347 436 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 MAP4K2Q12851 820 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 KRTAP21-3Q3LHN1 58 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 GKAP1Q5VSY0 366 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-203ENST00000598359 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 CCDC116Q8IYX3 515 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 EID3Q8N140 333 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 C4orf33Q8N1A6 199 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 OR7G1Q8NGA0 311 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 OR52R1Q8NGF1 315 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 CDC26Q8NHZ8 85 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 C16orf78Q8WTQ4 265 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 KAT2AQ92830 837 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 TP53INP1Q96A56 240 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 EXOSC8Q96B26 276 aaKnown RBP12.62□□□□□ -0.39
SCAF1-203ENST00000598359 RILPQ96NA2 401 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 FAIM2Q9BWQ8 316 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ALKBH4Q9NXW9 302 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 COQ3Q9NZJ6 369 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF639Q9UID6 485 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 MCM8Q9UJA3 840 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms