RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CAPN7Q9Y6W3 813 aa20.49■□□□□ 0.87
CHMP2A-204ENST00000597848 CACNA1BQ00975 2339 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 DYTNA2CJ06 578 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 RFXANKO14593 260 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 ITGA10O75578 1167 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 ANP32DO95626 131 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 GSNP06396 782 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 SNRPB2P08579 225 aaKnown RBP20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 CAPN3P20807 821 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 NR0B1P51843 470 aaKnown RBP20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 TP53BP2Q13625 1128 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 EXD3Q8N9H8 876 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 SFXN5Q8TD22 340 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 TM9SF4Q92544 642 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 MOAP1Q96BY2 351 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 ZBTB20Q9HC78 741 aaPredicted RBP20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNF71Q9NQZ8 489 aaPredicted RBP20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 PLA2G3Q9NZ20 509 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 NTMQ9P121 344 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 VPS4AQ9UN37 437 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 ERVK-11Q9UQG0 969 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 TP53TG5Q9Y2B4 290 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 PCDHGB7Q9Y5F8 929 aa20.48■□□□□ 0.87
CHMP2A-204ENST00000597848 DSPP15924 2871 aaKnown RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 DOCK10Q96BY6 2186 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 A0A1W2PP18 115 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 K7EM74 188 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ERN1O75460 977 aaKnown RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 F10P00742 488 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 UQCRC2P22695 453 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ADSLP30566 484 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 CDKN2CP42773 168 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 PPICP45877 212 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 SSR4P51571 173 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 DCAF7P61962 342 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNHIT3Q15649 155 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 NNATQ16517 81 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 PIGGQ5H8A4 983 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 BHLHB9Q6PI77 547 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 DNAJC14Q6Y2X3 702 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ASB18Q6ZVZ8 466 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 MTERF4Q7Z6M4 381 aaKnown RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 CLEC4FQ8N1N0 589 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ARMC10Q8N2F6 343 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 TMEM156Q8N614 296 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 TRIML2Q8N7C3 387 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 GOT1L1Q8NHS2 421 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 SLC22A8Q8TCC7 542 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 ADIPOR1Q96A54 375 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 TP53INP1Q96A56 240 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 VSTM2LQ96N03 204 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 MS4A4EQ96PG1 132 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 TRIM4Q9C037 500 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 SLC52A3Q9NQ40 469 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 SERHLQ9NQF3 203 aa20.47■□□□□ 0.87
CHMP2A-204ENST00000597848 EPG5Q9HCE0 2579 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 RNF103-CHMP3A0A140T963 221 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ANGPT2O15123 496 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 PSMG1O95456 288 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 WDPCPO95876 746 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 PDGFAP04085 211 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 SFTPCP11686 197 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 DRD5P21918 477 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 CHI3L1P36222 383 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 CASRP41180 1078 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 TRPC1P48995 793 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ARG2P78540 354 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 OC90Q02509 493 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 TLR1Q15399 786 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 MAPRE2Q15555 327 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 LACTB2Q53H82 288 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 C6orf120Q7Z4R8 191 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 WDR53Q7Z5U6 358 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 TAGAPQ8N103 731 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ZADH2Q8N4Q0 377 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ZNF441Q8N8Z8 693 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 TSPEARQ8WU66 669 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ASB15Q8WXK1 588 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 GTF2H4Q92759 462 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 C16orf58Q96GQ5 468 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 LCORQ96JN0 433 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 RASL10BQ96S79 203 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 SLC35A5Q9BS91 424 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 YIPF4Q9BSR8 244 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 NXF5Q9H1B4 397 aaKnown RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ANKRD10Q9NXR5 420 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 GPR55Q9Y2T6 319 aaPredicted RBP20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 NDUFAF1Q9Y375 327 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 ZZEF1O43149 2961 aa20.46■□□□□ 0.87
CHMP2A-204ENST00000597848 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 LOC100653049A0A140TA62 436 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 ASPDHA6ND91 283 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 NDUFAB1O14561 156 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 SLC22A2O15244 555 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 KRT34O76011 436 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 HMGN2P05204 90 aaKnown RBP20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 PRIM2P49643 509 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 NRG3P56975 720 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 CORO7P57737 925 aa20.45■□□□□ 0.86
CHMP2A-204ENST00000597848 LY6DQ14210 128 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms